Variant report

Variant	rs548049
Chromosome Location	chr11:107329059-107329060
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:33)
CpG islands
(count:0)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:33 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ELF1	chr11:107328221-107329162	HCT-116	colon:	n/a	n/a
2	GTF2F1	chr11:107328285-107329066	Hela-S3	cervix:	n/a	n/a
3	POLR2A	chr11:107328175-107329068	GM12878	blood:	n/a	n/a
4	ELF1	chr11:107328206-107329164	GM12878	blood:	n/a	n/a
5	RCOR1	chr11:107327948-107329118	K562	blood:	n/a	n/a
6	POLR2A	chr11:107327922-107329078	Raji	blood:	n/a	n/a
7	POLR2A	chr11:107327943-107329117	GM12878	blood:	n/a	n/a
8	TAF1	chr11:107328023-107329080	H1-hESC	embryonic stem cell:	n/a	n/a
9	POLR2A	chr11:107328325-107329193	HCT-116	colon:	n/a	n/a
10	POLR2A	chr11:107327940-107329347	GM12891	blood:	n/a	n/a
11	ELF1	chr11:107328162-107329189	HCT-116	colon:	n/a	n/a
12	SIN3A	chr11:107327849-107329062	H1-hESC	embryonic stem cell:	n/a	n/a
13	POLR2A	chr11:107328309-107329138	U87	brain:	n/a	n/a
14	POLR2A	chr11:107327989-107329132	MCF10A-Er-Src	breast:	n/a	n/a
15	MAX	chr11:107328341-107329066	SK-N-SH	brain:	n/a	n/a
16	WRNIP1	chr11:107328064-107329079	GM12878	blood:	n/a	n/a
17	TBL1XR1	chr11:107328221-107329076	GM12878	blood:	n/a	n/a
18	KAP1	chr11:107328092-107329062	HEK293	kidney:	n/a	n/a
19	POLR2A	chr11:107327962-107329098	GM12892	blood:	n/a	n/a
20	RCOR1	chr11:107328315-107329109	GM12878	blood:	n/a	n/a
21	POLR2A	chr11:107328183-107329092	PFSK-1	brain:	n/a	n/a
22	POLR2A	chr11:107328260-107329080	SK-N-SH	brain:	n/a	n/a
23	POLR2A	chr11:107328191-107329130	H1-hESC	embryonic stem cell:	n/a	n/a
24	POLR2A	chr11:107327970-107329141	H1-hESC	embryonic stem cell:	n/a	n/a
25	POLR2A	chr11:107328288-107329120	U87	brain:	n/a	n/a
26	TBP	chr11:107327898-107329080	GM12878	blood:	n/a	n/a
27	POLR2A	chr11:107328120-107329083	SK-N-MC	brain:	n/a	n/a
28	ELF1	chr11:107328215-107329120	SK-N-SH	brain:	n/a	n/a
29	POLR2A	chr11:107327987-107329067	GM18951	blood:	n/a	n/a
30	GABPA	chr11:107328304-107329141	SK-N-SH	brain:	n/a	chr11:107328649-107328660
31	POLR2A	chr11:107327950-107329130	GM18505	blood:	n/a	n/a
32	POLR2A	chr11:107328288-107329074	U87	brain:	n/a	n/a
33	SETDB1	chr11:107328449-107329092	U2OS	brain:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:107311896..107313858-chr11:107327138..107329604,2	K562	blood:

No data

Variant related genes	Relation type
CWF19L2	TF binding region
ENSG00000152404	Chromatin interaction

Extended variants
information (count: 103 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:87)

rs_ID	r²[population]
rs10444318	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11212134	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11212148	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11212174	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11212199	0.94[CEU][hapmap];1.00[CHB][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11212238	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12361977	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12362335	1.00[ASN][1000 genomes]
rs12363600	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12364307	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12365270	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12365910	1.00[ASN][1000 genomes]
rs1263297	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1272372	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12796588	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12800923	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs17587706	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1989215	1.00[ASN][1000 genomes]
rs2432867	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34129089	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34443916	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34661012	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34846704	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34938694	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35468021	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35504279	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs476028	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs480609	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs487705	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs504617	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs510528	1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs514117	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs517734	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs517929	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs518580	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs526875	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs527801	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs528337	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs529341	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs536636	1.00[CHB][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs537563	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs541782	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs546313	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs549909	1.00[CHB][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs554506	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs570235	0.84[CEU][hapmap];1.00[CHB][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs584778	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs588678	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs589415	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59590014	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs596268	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs599677	1.00[CHB][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs602625	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs608352	0.81[EUR][1000 genomes]
rs612080	1.00[CHB][hapmap]
rs619933	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs626091	1.00[CHB][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs627440	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs628609	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs629755	0.81[EUR][1000 genomes]
rs632186	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs632910	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs632942	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs633543	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs644954	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs649331	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs652429	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs659040	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs661085	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs664836	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs667198	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs668415	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67052454	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs673267	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs67382158	1.00[ASN][1000 genomes]
rs67428239	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs675081	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs68000908	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68027391	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7118326	1.00[ASN][1000 genomes]
rs7129866	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986689	1.00[ASN][1000 genomes]
rs72990457	1.00[ASN][1000 genomes]
rs72997052	1.00[ASN][1000 genomes]
rs784147	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs784149	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7924335	1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898365	chr11:106944975-107430300	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv898366	chr11:106944975-107433835	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv898367	chr11:106944975-107443420	Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv898369	chr11:106958304-107443420	Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
5	nsv898370	chr11:107027991-107430300	Enhancers Strong transcription Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
6	nsv898372	chr11:107049968-107433835	Enhancers Strong transcription Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
7	nsv1038368	chr11:107116577-107664181	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
8	nsv541163	chr11:107116577-107664181	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
9	nsv898373	chr11:107124903-107433835	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
10	esv2756363	chr11:107189790-107376790	ZNF genes & repeats Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
11	nsv556376	chr11:107250851-107486598	Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
12	nsv898375	chr11:107299631-107365191	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
13	nsv898376	chr11:107299631-107443420	Weak transcription Active TSS Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
14	nsv898377	chr11:107316499-107354312	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
15	esv2757476	chr11:107324276-107344568	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
16	esv2759864	chr11:107324276-107344568	Flanking Active TSS Active TSS Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs548049	CWF19L2	cis	Artery Tibial	GTEx
rs548049	CWF19L2	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:109 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:107326800-107329200	Active TSS	ES-I3 Cell Line	embryonic stem cell
2	chr11:107326800-107329200	Active TSS	HUES64 Cell Line	embryonic stem cell
3	chr11:107326800-107329200	Active TSS	iPS-20b Cell Line	embryonic stem cell
4	chr11:107326800-107329400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr11:107326800-107329400	Active TSS	GM12878-XiMat	blood
6	chr11:107327000-107329200	Active TSS	K562	blood
7	chr11:107327200-107329200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:107327400-107329200	Active TSS	H1 Cell Line	embryonic stem cell
9	chr11:107327400-107329200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr11:107327400-107329200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr11:107327400-107329200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr11:107327400-107329200	Active TSS	Psoas Muscle	Psoas
13	chr11:107327400-107329200	Active TSS	A549	lung
14	chr11:107327400-107329400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr11:107327600-107329200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr11:107327600-107329200	Active TSS	HUES6 Cell Line	embryonic stem cell
17	chr11:107327600-107329200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
18	chr11:107327600-107329200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr11:107327600-107329200	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr11:107327600-107329200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
21	chr11:107327600-107329200	Active TSS	Fetal Brain Male	brain
22	chr11:107327600-107329200	Active TSS	Fetal Muscle Trunk	muscle
23	chr11:107327600-107329200	Active TSS	Ovary	ovary
24	chr11:107327600-107329200	Active TSS	Thymus	Thymus
25	chr11:107327600-107329200	Active TSS	NHDF-Ad	bronchial
26	chr11:107327600-107329200	Active TSS	NHLF	lung
27	chr11:107327600-107329400	Active TSS	Right Atrium	heart
28	chr11:107327800-107329200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr11:107327800-107329200	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
30	chr11:107327800-107329200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr11:107327800-107329200	Active TSS	Aorta	Aorta
32	chr11:107327800-107329200	Active TSS	Brain Germinal Matrix	brain
33	chr11:107327800-107329200	Active TSS	Colonic Mucosa	Colon
34	chr11:107327800-107329200	Active TSS	Fetal Intestine Large	intestine
35	chr11:107327800-107329200	Active TSS	Fetal Intestine Small	intestine
36	chr11:107327800-107329200	Active TSS	Pancreatic Islets	Pancreatic Islet
37	chr11:107327800-107329200	Active TSS	Fetal Lung	lung
38	chr11:107327800-107329200	Active TSS	Fetal Muscle Leg	muscle
39	chr11:107327800-107329200	Active TSS	Fetal Stomach	stomach
40	chr11:107327800-107329200	Active TSS	Fetal Thymus	thymus
41	chr11:107327800-107329200	Active TSS	Left Ventricle	heart
42	chr11:107327800-107329200	Active TSS	Right Ventricle	heart
43	chr11:107327800-107329200	Active TSS	Stomach Mucosa	stomach
44	chr11:107328000-107329200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr11:107328000-107329200	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
46	chr11:107328000-107329200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
47	chr11:107328000-107329200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr11:107328000-107329200	Active TSS	Brain Anterior Caudate	brain
49	chr11:107328000-107329200	Active TSS	Brain Substantia Nigra	brain
50	chr11:107328000-107329200	Active TSS	Colon Smooth Muscle	Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links