Variant report

Variant rs548262569
Chromosome Location chr9:687758-687759
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:670800-706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr9:674400-693200 Weak transcription Primary T cells from cord blood blood
4 chr9:677800-689400 Weak transcription Fetal Muscle Trunk muscle
5 chr9:678000-688000 Weak transcription Gastric stomach
6 chr9:678000-695200 Weak transcription Colonic Mucosa Colon
7 chr9:680800-692800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr9:682800-688000 Enhancers Skeletal Muscle Female skeletal muscle
9 chr9:682800-696800 Enhancers Placenta Amnion Placenta Amnion
10 chr9:683000-688000 Active TSS Aorta Aorta
11 chr9:683600-692000 Weak transcription Duodenum Mucosa Duodenum
12 chr9:683600-694600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr9:683800-689000 Enhancers Placenta Placenta
14 chr9:684400-688200 Enhancers Stomach Mucosa stomach
15 chr9:684600-690400 Weak transcription H9 Cell Line embryonic stem cell
16 chr9:684600-692800 Weak transcription Ovary ovary
17 chr9:684800-688200 Weak transcription Fetal Kidney kidney
18 chr9:684800-689200 Weak transcription Fetal Muscle Leg muscle
19 chr9:684800-689600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr9:684800-692800 Enhancers Brain Inferior Temporal Lobe brain
21 chr9:685200-689400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr9:685200-689400 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr9:685200-689800 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr9:685200-692800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr9:685200-692800 Weak transcription Fetal Stomach stomach
26 chr9:685200-693000 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr9:685400-688400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr9:685400-688400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr9:685400-688400 Flanking Active TSS NHEK skin
30 chr9:685400-690200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr9:685600-688800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr9:685600-693200 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr9:685800-687800 Enhancers Skeletal Muscle Male skeletal muscle
34 chr9:685800-689400 Flanking Active TSS HMEC breast
35 chr9:685800-689800 Enhancers Left Ventricle heart
36 chr9:685800-693000 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr9:685800-693200 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr9:686400-689600 Transcr. at gene 5' and 3' HepG2 liver
39 chr9:686600-692800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr9:686800-688000 Active TSS Esophagus oesophagus
41 chr9:686800-688000 Weak transcription Psoas Muscle Psoas
42 chr9:686800-688000 Weak transcription Right Atrium heart
43 chr9:686800-688800 Enhancers Liver Liver
44 chr9:686800-689000 Flanking Active TSS Adipose Nuclei Adipose
45 chr9:686800-689400 Active TSS Right Ventricle heart
46 chr9:686800-689600 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr9:686800-689600 Weak transcription Brain Cingulate Gyrus brain
48 chr9:686800-689800 Weak transcription Fetal Heart heart
49 chr9:686800-690400 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr9:686800-690800 Weak transcription Stomach Smooth Muscle stomach

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