Variant report

Variant	rs549897282
Chromosome Location	chr10:91999597-91999598
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:44 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043571	chr10:91568555-92036154	Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv551874	chr10:91570211-92036154	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv949678	chr10:91589048-92016474	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
4	nsv895883	chr10:91610601-92195828	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
5	nsv1039731	chr10:91645718-92198264	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
6	nsv540743	chr10:91645718-92198264	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
7	nsv467430	chr10:91681344-92297943	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
8	nsv551875	chr10:91681344-92297943	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	esv3375393	chr10:91880933-92243227	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
10	esv2422237	chr10:91940542-92547558	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
11	esv3318363	chr10:91996572-92001470	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
12	esv3318374	chr10:91996572-92001470	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
13	esv3530825	chr10:91998401-92002130	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv1798083	chr10:91998416-92002491	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv1807940	chr10:91998416-92002491	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv1814546	chr10:91998416-92002491	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
17	esv1847829	chr10:91998416-92002491	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
18	esv1850027	chr10:91998416-92002491	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
19	nsv442202	chr10:91998416-92002491	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
20	esv3530802	chr10:91998422-92002079	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
21	esv3530791	chr10:91998458-92002096	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
22	esv13900	chr10:91998471-92002033	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
23	esv3318385	chr10:91998472-92004470	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
24	esv3318396	chr10:91998472-92004470	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
25	esv3530780	chr10:91998474-92002058	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
26	esv3530814	chr10:91998517-92002041	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
27	esv1811342	chr10:91998521-92001082	Weak transcription	n/a	n/a	inside rSNPs	n/a
28	esv1813892	chr10:91998521-92001082	Weak transcription	n/a	n/a	inside rSNPs	n/a
29	esv1843483	chr10:91998521-92001825	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
30	esv1848190	chr10:91998521-92001825	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
31	esv1810022	chr10:91998521-92002112	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
32	esv1810439	chr10:91998521-92002112	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
33	esv1804437	chr10:91998521-92007112	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
34	nsv825507	chr10:91998522-92001882	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
35	esv3530836	chr10:91998536-92002035	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
36	nsv514584	chr10:91998564-92001740	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
37	esv1804726	chr10:91998574-92001082	Weak transcription	n/a	n/a	inside rSNPs	n/a
38	esv1808391	chr10:91998574-92001082	Weak transcription	n/a	n/a	inside rSNPs	n/a
39	esv1813885	chr10:91998574-92001082	Weak transcription	n/a	n/a	inside rSNPs	n/a
40	esv1845862	chr10:91998574-92001082	Weak transcription	n/a	n/a	inside rSNPs	n/a
41	esv1811193	chr10:91998574-92001825	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
42	esv1843780	chr10:91998574-92001825	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
43	esv1849185	chr10:91998574-92001825	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
44	esv1849340	chr10:91999112-92001825	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91992600-92005000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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