Variant report

Variant	rs552016412
Chromosome Location	chr8:51031549-51031550
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:51030711..51032424-chr8:51036929..51039858,2	MCF-7	breast:

Extended variants
information (count: 73 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:73 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353749	chr8:50530807-51139242	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv916392	chr8:50827638-51395140	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv2759613	chr8:50873293-51137995	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2758621	chr8:50886593-51137995	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv890871	chr8:50936174-51040022	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv890872	chr8:50946702-51032813	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv6184	chr8:50997525-51060432	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv1034538	chr8:50998331-51032943	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv539605	chr8:50998331-51032943	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv1029139	chr8:51003318-51032943	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv539606	chr8:51006600-51057478	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv1023923	chr8:51020615-51039772	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv1829361	chr8:51021638-51101126	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
14	nsv508509	chr8:51021837-51041388	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv3361408	chr8:51023448-51039042	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
16	nsv1034545	chr8:51027285-51039772	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
17	nsv26	chr8:51027781-51044881	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
18	esv3481035	chr8:51029299-51034097	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv3481036	chr8:51029299-51034097	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
20	esv1829293	chr8:51029371-51038255	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
21	esv1831308	chr8:51029371-51038255	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
22	esv1832317	chr8:51029371-51038255	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv1833149	chr8:51029371-51038255	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
24	esv1833241	chr8:51029371-51038255	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
25	nsv437619	chr8:51029371-51039712	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
26	esv3488684	chr8:51029899-51039197	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
27	nsv611313	chr8:51029983-51035919	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
28	nsv611314	chr8:51029983-51036683	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
29	nsv611315	chr8:51029983-51037283	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
30	nsv611316	chr8:51029983-51037674	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
31	nsv611317	chr8:51029983-51038255	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
32	esv1008187	chr8:51030141-51039300	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
33	esv2475988	chr8:51030289-51038868	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
34	esv3488680	chr8:51030349-51039347	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
35	esv1830133	chr8:51030706-51038482	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
36	nsv8339	chr8:51030782-51038885	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
37	esv6927	chr8:51030863-51038531	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
38	esv3481037	chr8:51030899-51038097	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
39	esv3481038	chr8:51030899-51038097	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
40	esv2246196	chr8:51030920-51038488	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
41	esv3479190	chr8:51030956-51038437	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
42	esv3488683	chr8:51030977-51038437	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
43	esv2503933	chr8:51030980-51039024	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
44	nsv824624	chr8:51031003-51038319	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
45	esv3488682	chr8:51031007-51038380	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
46	esv3479189	chr8:51031008-51038407	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
47	esv3479188	chr8:51031016-51038403	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
48	esv3328	chr8:51031029-51038533	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
49	esv3479187	chr8:51031030-51038353	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
50	esv3488681	chr8:51031036-51038374	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:51018400-51039600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr8:51031000-51031600	Enhancers	Osteobl	bone
3	chr8:51031400-51034800	Weak transcription	Brain Germinal Matrix	brain

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