The 2.0 version of rSNPBase

Variant report

Variant rs555527
Chromosome Location chr11:65937947-65937948
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:65905200-65947000 Weak transcription Fetal Lung lung
2 chr11:65905400-65939600 Weak transcription Monocytes-CD14+_RO01746 blood
3 chr11:65905800-65952800 Weak transcription Fetal Stomach stomach
4 chr11:65906000-65960200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr11:65910000-65939600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:65910600-65939600 Weak transcription NHDF-Ad bronchial
7 chr11:65911000-65939400 Weak transcription NH-A brain
8 chr11:65911000-65943200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr11:65913400-65951000 Weak transcription Spleen Spleen
10 chr11:65914200-65939600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr11:65918000-65949200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr11:65919000-65939800 Weak transcription Primary B cells from peripheral blood blood
13 chr11:65920400-65954800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr11:65924800-65943200 Weak transcription NHEK skin
15 chr11:65925000-65939400 Weak transcription Osteobl bone
16 chr11:65925000-65939800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr11:65925200-65939600 Weak transcription HMEC breast
18 chr11:65925400-65955000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr11:65925600-65952800 Weak transcription Primary hematopoietic stem cells blood
20 chr11:65925800-65955000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr11:65927200-65939800 Weak transcription Lung lung
22 chr11:65927200-65951000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr11:65927200-65951000 Weak transcription Pancreas Pancrea
24 chr11:65927200-65958400 Weak transcription Gastric stomach
25 chr11:65927400-65939600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr11:65927400-65939800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr11:65927600-65947600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr11:65928000-65939600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr11:65928600-65939800 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr11:65928600-65945000 Weak transcription GM12878-XiMat blood
31 chr11:65928800-65957000 Weak transcription Left Ventricle heart
32 chr11:65929400-65960200 Weak transcription HSMM muscle
33 chr11:65929600-65939000 Weak transcription Fetal Heart heart
34 chr11:65929600-65944400 Weak transcription Rectal Smooth Muscle rectum
35 chr11:65929600-65946400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr11:65929600-65977800 Weak transcription HSMMtube muscle
37 chr11:65929800-65944400 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr11:65930000-65960200 Weak transcription Colon Smooth Muscle Colon
39 chr11:65930000-65960800 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr11:65930200-65939800 Weak transcription Esophagus oesophagus
41 chr11:65930200-65942600 Weak transcription Adipose Nuclei Adipose
42 chr11:65930800-65939800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr11:65931200-65939600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr11:65931600-65939400 Weak transcription Stomach Smooth Muscle stomach
45 chr11:65931600-65939600 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr11:65932800-65939400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr11:65932800-65942400 Weak transcription Placenta Placenta
48 chr11:65933000-65939800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr11:65933200-65939600 Weak transcription Primary B cells from cord blood blood
50 chr11:65933600-65939600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015