Variant report

Variant rs55654146
Chromosome Location chr15:59455272-59455273
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:59398000-59462000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr15:59424400-59461400 Strong transcription Hela-S3 cervix
3 chr15:59425800-59459600 Strong transcription Liver Liver
4 chr15:59431800-59467200 Weak transcription Fetal Brain Female brain
5 chr15:59432000-59465600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr15:59432600-59457400 Strong transcription Placenta Placenta
7 chr15:59433400-59456000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr15:59434000-59457600 Strong transcription GM12878-XiMat blood
9 chr15:59434200-59467000 Strong transcription Rectal Mucosa Donor 31 rectum
10 chr15:59434400-59455600 Strong transcription Sigmoid Colon Sigmoid Colon
11 chr15:59434600-59455400 Strong transcription Adipose Nuclei Adipose
12 chr15:59434600-59455600 Strong transcription Primary B cells from peripheral blood blood
13 chr15:59434600-59455800 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr15:59436000-59473000 Weak transcription Brain Germinal Matrix brain
15 chr15:59436200-59456000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr15:59437800-59484400 Weak transcription Fetal Brain Male brain
17 chr15:59438000-59458400 Strong transcription Duodenum Mucosa Duodenum
18 chr15:59441000-59455400 Strong transcription Muscle Satellite Cultured Cells --
19 chr15:59441000-59457800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr15:59441000-59458000 Strong transcription A549 lung
21 chr15:59441200-59457800 Strong transcription Osteobl bone
22 chr15:59441600-59455400 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr15:59441800-59455400 Strong transcription HUES64 Cell Line embryonic stem cell
24 chr15:59441800-59459600 Strong transcription HUES48 Cell Line embryonic stem cell
25 chr15:59442400-59455400 Strong transcription Fetal Stomach stomach
26 chr15:59442400-59457600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr15:59442600-59457800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr15:59442800-59457600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr15:59443200-59462600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr15:59443400-59461800 Weak transcription Thymus Thymus
31 chr15:59443400-59462400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr15:59444000-59457000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr15:59445600-59479600 Weak transcription Fetal Kidney kidney
34 chr15:59445800-59462000 Weak transcription Stomach Mucosa stomach
35 chr15:59445800-59467000 Weak transcription Fetal Heart heart
36 chr15:59446000-59455400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr15:59447000-59463600 Weak transcription Primary B cells from cord blood blood
38 chr15:59449200-59455400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr15:59449200-59456200 Strong transcription HUVEC blood vessel
40 chr15:59449600-59455400 Strong transcription iPS-18 Cell Line embryonic stem cell
41 chr15:59449600-59455400 Strong transcription Skeletal Muscle Male skeletal muscle
42 chr15:59449600-59457800 Strong transcription Skeletal Muscle Female skeletal muscle
43 chr15:59450200-59458000 Strong transcription Fetal Muscle Trunk muscle
44 chr15:59450400-59456800 Strong transcription Aorta Aorta
45 chr15:59451200-59456600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr15:59451200-59457600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr15:59451200-59462600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr15:59451200-59473600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr15:59451400-59455400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr15:59451400-59470400 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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