Variant report
| Variant | rs55654555 |
|---|---|
| Chromosome Location | chr9:97772628-97772629 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:97767800-97773600 | Transcr. at gene 5' and 3' | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 2 | chr9:97767800-97775200 | Transcr. at gene 5' and 3' | A549 | lung |
| 3 | chr9:97768000-97776400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 4 | chr9:97768000-97781000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 5 | chr9:97768000-97781000 | Weak transcription | Gastric | stomach |
| 6 | chr9:97768000-97783800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 7 | chr9:97768000-97786200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 8 | chr9:97768200-97779400 | Weak transcription | Fetal Brain Female | brain |
| 9 | chr9:97768200-97779800 | Weak transcription | K562 | blood |
| 10 | chr9:97768800-97781800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 11 | chr9:97768800-97785600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 12 | chr9:97769000-97779400 | Weak transcription | GM12878-XiMat | blood |
| 13 | chr9:97769000-97783800 | Weak transcription | Fetal Brain Male | brain |
| 14 | chr9:97769000-97787600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 15 | chr9:97769200-97772800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 16 | chr9:97769600-97784200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 17 | chr9:97769600-97790200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 18 | chr9:97770000-97781200 | Weak transcription | Small Intestine | intestine |
| 19 | chr9:97770400-97774600 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 20 | chr9:97770600-97773200 | Strong transcription | Placenta | Placenta |
| 21 | chr9:97770600-97774200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 22 | chr9:97770600-97780800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 23 | chr9:97770800-97773800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 24 | chr9:97770800-97777400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 25 | chr9:97770800-97781600 | Weak transcription | Colonic Mucosa | Colon |
| 26 | chr9:97770800-97782000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 27 | chr9:97770800-97782200 | Weak transcription | Lung | lung |
| 28 | chr9:97770800-97810000 | Weak transcription | Primary T cells from cord blood | blood |
| 29 | chr9:97771000-97772800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 30 | chr9:97771000-97773200 | Genic enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 31 | chr9:97771000-97773200 | Genic enhancers | NH-A | brain |
| 32 | chr9:97771000-97773400 | Enhancers | Fetal Heart | heart |
| 33 | chr9:97771000-97774200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 34 | chr9:97771000-97775800 | Enhancers | Brain Hippocampus Middle | brain |
| 35 | chr9:97771000-97777000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 36 | chr9:97771000-97778200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 37 | chr9:97771000-97780800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 38 | chr9:97771000-97781600 | Weak transcription | Primary B cells from cord blood | blood |
| 39 | chr9:97771200-97772800 | Genic enhancers | NHLF | lung |
| 40 | chr9:97771200-97773200 | Genic enhancers | HepG2 | liver |
| 41 | chr9:97771200-97774000 | Genic enhancers | Left Ventricle | heart |
| 42 | chr9:97771200-97774800 | Genic enhancers | HSMM | muscle |
| 43 | chr9:97771200-97776000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 44 | chr9:97771200-97777400 | Genic enhancers | NHDF-Ad | bronchial |
| 45 | chr9:97771200-97777600 | Weak transcription | Fetal Kidney | kidney |
| 46 | chr9:97771400-97773000 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr9:97771400-97773200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr9:97771400-97774000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 49 | chr9:97771400-97774200 | Strong transcription | Liver | Liver |
| 50 | chr9:97771400-97774800 | Strong transcription | Hela-S3 | cervix |
