The 2.0 version of rSNPBase

Variant report

Variant rs7848054
Chromosome Location chr9:97628487-97628488
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97616600-97629600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr9:97622600-97628600 Enhancers Primary hematopoietic stem cells blood
3 chr9:97623800-97629600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr9:97624200-97629400 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr9:97624200-97632800 Weak transcription Thymus Thymus
6 chr9:97624600-97629200 Weak transcription HMEC breast
7 chr9:97624600-97629400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr9:97624600-97629600 Weak transcription Primary monocytes fromperipheralblood blood
9 chr9:97624600-97629600 Weak transcription Esophagus oesophagus
10 chr9:97624600-97629800 Weak transcription Colonic Mucosa Colon
11 chr9:97624800-97632800 Weak transcription Duodenum Mucosa Duodenum
12 chr9:97625000-97628600 Weak transcription Liver Liver
13 chr9:97625000-97628600 Weak transcription Fetal Intestine Large intestine
14 chr9:97625000-97628600 Weak transcription Fetal Intestine Small intestine
15 chr9:97625000-97629600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr9:97625000-97630400 Weak transcription GM12878-XiMat blood
17 chr9:97625000-97630600 Weak transcription Pancreas Pancrea
18 chr9:97625000-97632000 Weak transcription Primary T cells from cord blood blood
19 chr9:97625000-97637800 Weak transcription Primary B cells from cord blood blood
20 chr9:97625200-97630000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr9:97625200-97631800 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr9:97625400-97631800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr9:97625400-97632200 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr9:97625600-97632800 Weak transcription Dnd41 blood
25 chr9:97625800-97629600 Enhancers Hela-S3 cervix
26 chr9:97626000-97628800 Enhancers Brain Substantia Nigra brain
27 chr9:97626000-97629000 Enhancers Fetal Stomach stomach
28 chr9:97626000-97630600 Weak transcription Lung lung
29 chr9:97626000-97638200 Enhancers HSMM muscle
30 chr9:97626000-97638400 Enhancers HSMMtube muscle
31 chr9:97626200-97629400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr9:97626200-97629400 Enhancers Fetal Heart heart
33 chr9:97626200-97629400 Enhancers Osteobl bone
34 chr9:97626200-97629600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr9:97626200-97629600 Enhancers Rectal Smooth Muscle rectum
36 chr9:97626200-97632400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr9:97626400-97629600 Weak transcription Small Intestine intestine
38 chr9:97626400-97630600 Weak transcription Spleen Spleen
39 chr9:97626400-97632800 Weak transcription Right Ventricle heart
40 chr9:97626600-97629400 Enhancers HUVEC blood vessel
41 chr9:97626600-97631600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr9:97626600-97631600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr9:97626600-97631800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr9:97626800-97629200 Enhancers NH-A brain
45 chr9:97626800-97629600 Enhancers Fetal Lung lung
46 chr9:97626800-97632000 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr9:97627000-97630600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr9:97627200-97628600 Enhancers HUES48 Cell Line embryonic stem cell
49 chr9:97627200-97630200 Enhancers HUES64 Cell Line embryonic stem cell
50 chr9:97627200-97630400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015