The 2.0 version of rSNPBase

Variant report

Variant rs57057766
Chromosome Location chr9:97566644-97566645
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97545400-97567200 Weak transcription Small Intestine intestine
2 chr9:97545800-97567000 Weak transcription Fetal Brain Female brain
3 chr9:97548600-97570400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr9:97549200-97567800 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr9:97550200-97571200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr9:97556800-97575800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr9:97557400-97566800 Weak transcription Fetal Brain Male brain
8 chr9:97557400-97567400 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr9:97560400-97570000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr9:97561000-97568200 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr9:97561200-97568200 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr9:97562000-97567600 Strong transcription Primary T cells from cord blood blood
13 chr9:97562000-97572800 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr9:97562200-97571200 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr9:97562400-97567200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr9:97563400-97584200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr9:97563600-97568000 Weak transcription Rectal Smooth Muscle rectum
18 chr9:97563600-97569200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr9:97563600-97569600 Weak transcription Primary T cells fromperipheralblood blood
20 chr9:97563600-97594400 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr9:97563800-97567000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr9:97563800-97567000 Weak transcription HUVEC blood vessel
23 chr9:97563800-97567200 Weak transcription Primary monocytes fromperipheralblood blood
24 chr9:97563800-97567200 Weak transcription Duodenum Mucosa Duodenum
25 chr9:97563800-97567200 Weak transcription Pancreas Pancrea
26 chr9:97563800-97567200 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr9:97563800-97567200 Weak transcription Right Atrium heart
28 chr9:97563800-97567200 Weak transcription Spleen Spleen
29 chr9:97563800-97567400 Weak transcription Colonic Mucosa Colon
30 chr9:97563800-97568000 Weak transcription Liver Liver
31 chr9:97563800-97568000 Weak transcription Ovary ovary
32 chr9:97563800-97568800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr9:97563800-97569200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr9:97563800-97569400 Weak transcription Right Ventricle heart
35 chr9:97563800-97569600 Weak transcription Fetal Muscle Trunk muscle
36 chr9:97563800-97569800 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr9:97563800-97569800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr9:97563800-97569800 Weak transcription Fetal Stomach stomach
39 chr9:97563800-97570200 Weak transcription Lung lung
40 chr9:97563800-97570400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr9:97563800-97570800 Weak transcription H1 Cell Line embryonic stem cell
42 chr9:97563800-97573400 Weak transcription H9 Cell Line embryonic stem cell
43 chr9:97563800-97573800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr9:97563800-97574600 Weak transcription Colon Smooth Muscle Colon
45 chr9:97563800-97579600 Weak transcription Gastric stomach
46 chr9:97563800-97584200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr9:97564000-97567200 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr9:97564000-97567200 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr9:97564000-97567400 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr9:97564000-97567800 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015