The 2.0 version of rSNPBase

Variant report

Variant rs56278112
Chromosome Location chr9:97554745-97554746
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97523400-97557800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr9:97523400-97563800 Weak transcription Fetal Kidney kidney
3 chr9:97530200-97563000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr9:97531600-97563000 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr9:97531600-97563000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr9:97533800-97555000 Weak transcription GM12878-XiMat blood
7 chr9:97536200-97557800 Weak transcription Primary hematopoietic stem cells blood
8 chr9:97541600-97554800 Weak transcription Right Ventricle heart
9 chr9:97545400-97556600 Weak transcription Fetal Brain Male brain
10 chr9:97545400-97567200 Weak transcription Small Intestine intestine
11 chr9:97545800-97556000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr9:97545800-97556400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr9:97545800-97560600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr9:97545800-97562200 Weak transcription Ovary ovary
15 chr9:97545800-97562200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr9:97545800-97563000 Weak transcription Adipose Nuclei Adipose
17 chr9:97545800-97563000 Weak transcription Gastric stomach
18 chr9:97545800-97563000 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr9:97545800-97563000 Weak transcription Rectal Smooth Muscle rectum
20 chr9:97545800-97563200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr9:97545800-97567000 Weak transcription Fetal Brain Female brain
22 chr9:97546000-97554800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr9:97546000-97560400 Weak transcription Pancreas Pancrea
24 chr9:97546000-97561400 Weak transcription Colon Smooth Muscle Colon
25 chr9:97546000-97562400 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr9:97548000-97555000 Weak transcription Fetal Muscle Trunk muscle
27 chr9:97548000-97563000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr9:97548200-97554800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr9:97548200-97562200 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr9:97548200-97563600 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr9:97548200-97564800 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr9:97548400-97554800 Weak transcription Fetal Muscle Leg muscle
33 chr9:97548400-97563200 Weak transcription H9 Cell Line embryonic stem cell
34 chr9:97548600-97556200 Weak transcription Brain Anterior Caudate brain
35 chr9:97548600-97570400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr9:97548800-97554800 Weak transcription HSMM muscle
37 chr9:97548800-97558000 Weak transcription HepG2 liver
38 chr9:97549200-97567800 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr9:97549600-97554800 Weak transcription Primary T cells fromperipheralblood blood
40 chr9:97549600-97562600 Weak transcription Fetal Thymus thymus
41 chr9:97549600-97562800 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr9:97549800-97554800 Weak transcription Spleen Spleen
43 chr9:97549800-97561600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr9:97550200-97571200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr9:97551000-97556600 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr9:97551000-97556800 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr9:97551200-97554800 Weak transcription Esophagus oesophagus
48 chr9:97551400-97554800 Weak transcription Brain Angular Gyrus brain
49 chr9:97551400-97562200 Weak transcription Brain Cingulate Gyrus brain
50 chr9:97551400-97563000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015