Variant report

Variant rs12684470
Chromosome Location chr9:97663312-97663313
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97633400-97671800 Weak transcription Esophagus oesophagus
2 chr9:97655800-97668400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr9:97656400-97669000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr9:97657000-97663800 Weak transcription Stomach Mucosa stomach
5 chr9:97658800-97668400 Weak transcription Pancreas Pancrea
6 chr9:97660800-97702400 Weak transcription Primary B cells from cord blood blood
7 chr9:97661000-97666000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr9:97661600-97686200 Weak transcription Primary T cells from cord blood blood
9 chr9:97661800-97665200 Flanking Active TSS A549 lung
10 chr9:97662200-97663800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr9:97662200-97663800 Flanking Active TSS Muscle Satellite Cultured Cells --
12 chr9:97662200-97665200 Enhancers Placenta Amnion Placenta Amnion
13 chr9:97662400-97663400 Enhancers Fetal Muscle Leg muscle
14 chr9:97662400-97663400 Flanking Active TSS HepG2 liver
15 chr9:97662400-97663400 Flanking Active TSS NHDF-Ad bronchial
16 chr9:97662400-97663400 Flanking Active TSS Osteobl bone
17 chr9:97662400-97663800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr9:97662400-97664200 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr9:97662400-97664200 Enhancers Fetal Brain Male brain
20 chr9:97662400-97664800 Enhancers Brain Angular Gyrus brain
21 chr9:97662400-97664800 Enhancers Brain Cingulate Gyrus brain
22 chr9:97662400-97665000 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr9:97662400-97665000 Enhancers HMEC breast
24 chr9:97662400-97665200 Enhancers Brain Inferior Temporal Lobe brain
25 chr9:97662400-97665600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr9:97662400-97666200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr9:97662400-97678600 Enhancers Brain Substantia Nigra brain
28 chr9:97662600-97663400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr9:97662600-97663400 Flanking Active TSS Fetal Lung lung
30 chr9:97662600-97663400 Flanking Active TSS Hela-S3 cervix
31 chr9:97662600-97663400 Enhancers HUVEC blood vessel
32 chr9:97662600-97663400 Flanking Active TSS NHEK skin
33 chr9:97662600-97663600 Enhancers Fetal Stomach stomach
34 chr9:97662600-97664000 Weak transcription Psoas Muscle Psoas
35 chr9:97662600-97669600 Weak transcription Right Atrium heart
36 chr9:97662600-97670000 Weak transcription Fetal Intestine Small intestine
37 chr9:97662600-97680400 Enhancers Brain Hippocampus Middle brain
38 chr9:97662800-97663400 Enhancers Fetal Heart heart
39 chr9:97662800-97663400 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr9:97662800-97663400 Flanking Active TSS NH-A brain
41 chr9:97662800-97663400 Active TSS NHLF lung
42 chr9:97662800-97663800 Weak transcription Placenta Placenta
43 chr9:97662800-97664200 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr9:97662800-97664800 Enhancers Rectal Smooth Muscle rectum
45 chr9:97662800-97665400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr9:97662800-97669200 Weak transcription Lung lung
47 chr9:97662800-97670000 Weak transcription Fetal Intestine Large intestine
48 chr9:97663000-97663400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
49 chr9:97663000-97663400 Enhancers HSMMtube muscle
50 chr9:97663000-97663800 Enhancers Adipose Nuclei Adipose

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