The 2.0 version of rSNPBase

Variant report

Variant rs60240962
Chromosome Location chr9:97558139-97558140
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97523400-97563800 Weak transcription Fetal Kidney kidney
2 chr9:97530200-97563000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr9:97531600-97563000 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr9:97531600-97563000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr9:97545400-97567200 Weak transcription Small Intestine intestine
6 chr9:97545800-97560600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr9:97545800-97562200 Weak transcription Ovary ovary
8 chr9:97545800-97562200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr9:97545800-97563000 Weak transcription Adipose Nuclei Adipose
10 chr9:97545800-97563000 Weak transcription Gastric stomach
11 chr9:97545800-97563000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr9:97545800-97563000 Weak transcription Rectal Smooth Muscle rectum
13 chr9:97545800-97563200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr9:97545800-97567000 Weak transcription Fetal Brain Female brain
15 chr9:97546000-97560400 Weak transcription Pancreas Pancrea
16 chr9:97546000-97561400 Weak transcription Colon Smooth Muscle Colon
17 chr9:97546000-97562400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr9:97548000-97563000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr9:97548200-97562200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr9:97548200-97563600 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr9:97548200-97564800 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr9:97548400-97563200 Weak transcription H9 Cell Line embryonic stem cell
23 chr9:97548600-97570400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr9:97549200-97567800 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr9:97549600-97562600 Weak transcription Fetal Thymus thymus
26 chr9:97549600-97562800 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr9:97549800-97561600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr9:97550200-97571200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr9:97551400-97562200 Weak transcription Brain Cingulate Gyrus brain
30 chr9:97551400-97563000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr9:97552800-97558800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr9:97553400-97563000 Weak transcription Dnd41 blood
33 chr9:97554000-97558800 Strong transcription Primary T cells from cord blood blood
34 chr9:97554600-97558400 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr9:97554600-97558800 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr9:97554600-97558800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr9:97554600-97558800 Strong transcription Brain Inferior Temporal Lobe brain
38 chr9:97554800-97558200 Strong transcription Primary B cells from cord blood blood
39 chr9:97555000-97558200 Strong transcription Primary T cells fromperipheralblood blood
40 chr9:97555000-97563000 Weak transcription Left Ventricle heart
41 chr9:97555000-97563200 Weak transcription Right Ventricle heart
42 chr9:97555200-97558200 Weak transcription Esophagus oesophagus
43 chr9:97555200-97558800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr9:97555200-97558800 Weak transcription Osteobl bone
45 chr9:97555200-97560400 Weak transcription Stomach Mucosa stomach
46 chr9:97555200-97562200 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr9:97555200-97562200 Weak transcription HSMMtube muscle
48 chr9:97555200-97562600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr9:97555200-97563000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr9:97555200-97563000 Weak transcription Lung lung

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Last update: Aug 31, 2015