Variant report

Variant	rs55682741
Chromosome Location	chr8:67783845-67783846
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10099769	1.00[AMR][1000 genomes]
rs55873903	1.00[AMR][1000 genomes]
rs56030543	1.00[AMR][1000 genomes]
rs58529679	1.00[AMR][1000 genomes]
rs60211635	1.00[AMR][1000 genomes]
rs73691164	1.00[AMR][1000 genomes]
rs73693109	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026746	chr8:67639626-67794164	ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67783000-67784000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
2	chr8:67783600-67784000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr8:67783600-67784000	Enhancers	Brain Angular Gyrus	brain
4	chr8:67783800-67784000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:67783800-67784000	Enhancers	Rectal Mucosa Donor 29	rectum
6	chr8:67783800-67784000	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr8:67783800-67784000	Enhancers	NHDF-Ad	bronchial
8	chr8:67783800-67788400	Weak transcription	Psoas Muscle	Psoas

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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