Variant report

Variant	rs60211635
Chromosome Location	chr8:67555572-67555573
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10099769	1.00[AMR][1000 genomes]
rs55682741	1.00[AMR][1000 genomes]
rs55873903	1.00[AMR][1000 genomes]
rs58529679	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv831346	chr8:67486555-67675324	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67526400-67558000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:67539400-67574000	Weak transcription	Spleen	Spleen
3	chr8:67545200-67555800	Weak transcription	Brain Cingulate Gyrus	brain
4	chr8:67545200-67562400	Weak transcription	Fetal Heart	heart
5	chr8:67545200-67575200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr8:67545400-67562400	Weak transcription	Fetal Kidney	kidney
7	chr8:67545400-67575000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr8:67545600-67555600	Weak transcription	Brain Substantia Nigra	brain
9	chr8:67545600-67567000	Weak transcription	Small Intestine	intestine
10	chr8:67545600-67574400	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr8:67546200-67576800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr8:67547200-67555600	Weak transcription	Brain Angular Gyrus	brain
13	chr8:67547200-67561000	Weak transcription	Fetal Lung	lung
14	chr8:67547200-67563800	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr8:67547200-67574200	Weak transcription	Fetal Brain Male	brain
16	chr8:67547400-67555600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr8:67547400-67555600	Weak transcription	Brain Anterior Caudate	brain
18	chr8:67547400-67559800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr8:67547400-67561200	Weak transcription	Rectal Smooth Muscle	rectum
20	chr8:67547400-67561600	Weak transcription	A549	lung
21	chr8:67547400-67562000	Weak transcription	HMEC	breast
22	chr8:67547400-67562200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr8:67547400-67562400	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr8:67547400-67562400	Weak transcription	Duodenum Smooth Muscle	Duodenum
25	chr8:67547400-67574400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
26	chr8:67547400-67574400	Weak transcription	Skeletal Muscle Male	skeletal muscle
27	chr8:67547400-67574600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr8:67547600-67555600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
29	chr8:67547600-67555800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr8:67547600-67555800	Weak transcription	Liver	Liver
31	chr8:67547600-67557000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr8:67547600-67557600	Weak transcription	HepG2	liver
33	chr8:67547600-67558000	Weak transcription	Primary B cells from peripheral blood	blood
34	chr8:67547600-67558000	Weak transcription	Rectal Mucosa Donor 31	rectum
35	chr8:67547600-67560400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr8:67547600-67560400	Weak transcription	Dnd41	blood
37	chr8:67547600-67560400	Weak transcription	HSMM	muscle
38	chr8:67547600-67560800	Weak transcription	Fetal Muscle Trunk	muscle
39	chr8:67547600-67561000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr8:67547600-67561000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr8:67547600-67561000	Weak transcription	Adipose Nuclei	Adipose
42	chr8:67547600-67561000	Weak transcription	Fetal Intestine Large	intestine
43	chr8:67547600-67561000	Weak transcription	Sigmoid Colon	Sigmoid Colon
44	chr8:67547600-67561200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr8:67547600-67561400	Weak transcription	GM12878-XiMat	blood
46	chr8:67547600-67561600	Weak transcription	Fetal Brain Female	brain
47	chr8:67547600-67561800	Weak transcription	HUES48 Cell Line	embryonic stem cell
48	chr8:67547600-67561800	Weak transcription	Skeletal Muscle Female	skeletal muscle
49	chr8:67547600-67561800	Weak transcription	HSMMtube	muscle
50	chr8:67547600-67562400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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