Variant report

Variant rs55705724
Chromosome Location chr21:46387754-46387755
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46361600-46389200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr21:46364200-46391400 Strong transcription Dnd41 blood
3 chr21:46379600-46388400 Weak transcription Stomach Mucosa stomach
4 chr21:46380000-46396600 Weak transcription Brain Substantia Nigra brain
5 chr21:46380200-46402600 Weak transcription Aorta Aorta
6 chr21:46381200-46391200 Enhancers Fetal Heart heart
7 chr21:46381200-46396400 Weak transcription Psoas Muscle Psoas
8 chr21:46381600-46389400 Weak transcription NHDF-Ad bronchial
9 chr21:46382600-46388200 Weak transcription Liver Liver
10 chr21:46382800-46404800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr21:46383000-46387800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr21:46383600-46390400 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr21:46384200-46390000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr21:46384200-46391200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr21:46384200-46391400 Strong transcription H1 Cell Line embryonic stem cell
16 chr21:46384200-46399600 Strong transcription Fetal Intestine Small intestine
17 chr21:46384400-46388600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr21:46384600-46389800 Genic enhancers Fetal Thymus thymus
19 chr21:46384800-46389000 Genic enhancers Primary hematopoietic stem cells short term culture blood
20 chr21:46384800-46389400 Strong transcription iPS-15b Cell Line embryonic stem cell
21 chr21:46384800-46390000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr21:46384800-46390600 Enhancers Primary monocytes fromperipheralblood blood
23 chr21:46385000-46388200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr21:46385000-46393200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr21:46385000-46401400 Strong transcription Thymus Thymus
26 chr21:46385200-46388000 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr21:46385200-46390000 Enhancers Primary B cells from cord blood blood
28 chr21:46385200-46393000 Genic enhancers Fetal Muscle Leg muscle
29 chr21:46385400-46393000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
30 chr21:46385400-46393800 Genic enhancers Fetal Muscle Trunk muscle
31 chr21:46385600-46387800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr21:46385600-46388000 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr21:46385600-46388400 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
34 chr21:46385600-46388600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr21:46385600-46389400 Genic enhancers Breast Myoepithelial Primary Cells Breast
36 chr21:46385800-46387800 Genic enhancers NHEK skin
37 chr21:46385800-46393000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr21:46386000-46387800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr21:46386000-46387800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr21:46386000-46388000 Enhancers Primary T helper naive cells from peripheral blood blood
41 chr21:46386000-46388600 Enhancers Right Atrium heart
42 chr21:46386000-46389400 Weak transcription HSMMtube muscle
43 chr21:46386000-46389400 Weak transcription Osteobl bone
44 chr21:46386200-46388000 Flanking Active TSS Stomach Smooth Muscle stomach
45 chr21:46386200-46388600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr21:46386200-46389600 Weak transcription HSMM muscle
47 chr21:46386200-46391200 Genic enhancers Fetal Stomach stomach
48 chr21:46386200-46393200 Genic enhancers Spleen Spleen
49 chr21:46386400-46387800 Enhancers Brain Anterior Caudate brain
50 chr21:46386400-46392400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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