Variant report

Variant rs59573927
Chromosome Location chr21:46390592-46390593
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46364200-46391400 Strong transcription Dnd41 blood
2 chr21:46380000-46396600 Weak transcription Brain Substantia Nigra brain
3 chr21:46380200-46402600 Weak transcription Aorta Aorta
4 chr21:46381200-46391200 Enhancers Fetal Heart heart
5 chr21:46381200-46396400 Weak transcription Psoas Muscle Psoas
6 chr21:46382800-46404800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr21:46384200-46391200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr21:46384200-46391400 Strong transcription H1 Cell Line embryonic stem cell
9 chr21:46384200-46399600 Strong transcription Fetal Intestine Small intestine
10 chr21:46384800-46390600 Enhancers Primary monocytes fromperipheralblood blood
11 chr21:46385000-46393200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr21:46385000-46401400 Strong transcription Thymus Thymus
13 chr21:46385200-46393000 Genic enhancers Fetal Muscle Leg muscle
14 chr21:46385400-46393000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
15 chr21:46385400-46393800 Genic enhancers Fetal Muscle Trunk muscle
16 chr21:46385800-46393000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
17 chr21:46386200-46391200 Genic enhancers Fetal Stomach stomach
18 chr21:46386200-46393200 Genic enhancers Spleen Spleen
19 chr21:46386400-46392400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr21:46386400-46400600 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr21:46386600-46391200 Genic enhancers Lung lung
22 chr21:46386800-46400600 Weak transcription Small Intestine intestine
23 chr21:46387000-46391200 Strong transcription Sigmoid Colon Sigmoid Colon
24 chr21:46387200-46391000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr21:46387400-46391000 Strong transcription HUES48 Cell Line embryonic stem cell
26 chr21:46387400-46391000 Genic enhancers Placenta Placenta
27 chr21:46387400-46391000 Enhancers Placenta Amnion Placenta Amnion
28 chr21:46387600-46391000 Strong transcription Brain Germinal Matrix brain
29 chr21:46387600-46391200 Weak transcription Fetal Brain Male brain
30 chr21:46387600-46396000 Strong transcription Pancreas Pancrea
31 chr21:46387800-46390800 Strong transcription Duodenum Mucosa Duodenum
32 chr21:46387800-46391000 Enhancers Primary hematopoietic stem cells blood
33 chr21:46387800-46391000 Genic enhancers Skeletal Muscle Male skeletal muscle
34 chr21:46387800-46392600 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr21:46387800-46397800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr21:46387800-46399000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr21:46388400-46390800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr21:46388400-46393600 Weak transcription Fetal Brain Female brain
39 chr21:46388600-46390800 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr21:46388600-46391000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr21:46388600-46391400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
42 chr21:46388600-46394600 Weak transcription Liver Liver
43 chr21:46388600-46396800 Weak transcription Brain Hippocampus Middle brain
44 chr21:46388600-46397600 Weak transcription NHEK skin
45 chr21:46388600-46398200 Strong transcription Gastric stomach
46 chr21:46388600-46398400 Weak transcription Brain Angular Gyrus brain
47 chr21:46388600-46399800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr21:46388800-46391400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr21:46389000-46390600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr21:46389000-46390600 Enhancers NH-A brain

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