Variant report

Variant	rs557276133
Chromosome Location	chr8:35802471-35802472
allele	-/TTTA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032540	chr8:35565491-35949132	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1024552	chr8:35655964-36210907	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
4	nsv539548	chr8:35655964-36210907	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	nsv831286	chr8:35802388-35950586	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35798200-35803000	Weak transcription	Brain Germinal Matrix	brain
2	chr8:35798400-35802600	Weak transcription	Brain Substantia Nigra	brain
3	chr8:35801000-35804200	Enhancers	Muscle Satellite Cultured Cells	--
4	chr8:35801200-35803800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr8:35801200-35805000	Enhancers	HSMM	muscle
6	chr8:35801400-35803600	Enhancers	Brain Hippocampus Middle	brain
7	chr8:35801600-35803200	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr8:35801600-35803800	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr8:35801800-35802600	Enhancers	Brain Angular Gyrus	brain
10	chr8:35801800-35803600	Enhancers	Fetal Intestine Small	intestine
11	chr8:35801800-35803800	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr8:35801800-35803800	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr8:35801800-35803800	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr8:35801800-35804600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr8:35802000-35802800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr8:35802000-35803600	Enhancers	H1 Cell Line	embryonic stem cell
17	chr8:35802000-35803800	Enhancers	H9 Cell Line	embryonic stem cell
18	chr8:35802000-35803800	Enhancers	HUES6 Cell Line	embryonic stem cell
19	chr8:35802000-35803800	Enhancers	iPS-15b Cell Line	embryonic stem cell
20	chr8:35802000-35803800	Enhancers	HSMMtube	muscle
21	chr8:35802200-35802600	Enhancers	Fetal Intestine Large	intestine
22	chr8:35802200-35803400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
23	chr8:35802200-35803800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr8:35802200-35806800	Weak transcription	Brain Anterior Caudate	brain
25	chr8:35802400-35803200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr8:35802400-35803400	Weak transcription	Cortex derived primary cultured neurospheres	brain
27	chr8:35802400-35803600	Weak transcription	Brain Cingulate Gyrus	brain
28	chr8:35802400-35803600	Weak transcription	Osteobl	bone
29	chr8:35802400-35803800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr8:35802400-35804400	Weak transcription	Brain Inferior Temporal Lobe	brain

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