The 2.0 version of rSNPBase

Variant report

Variant rs55732055
Chromosome Location chr11:73062575-73062576
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:73046600-73075400 Weak transcription A549 lung
2 chr11:73053800-73064400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr11:73053800-73065800 Weak transcription Fetal Kidney kidney
4 chr11:73053800-73070000 Weak transcription HUVEC blood vessel
5 chr11:73054400-73066600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr11:73054600-73081800 Strong transcription Fetal Intestine Small intestine
7 chr11:73054800-73063800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr11:73054800-73072800 Weak transcription H9 Cell Line embryonic stem cell
9 chr11:73055000-73071000 Weak transcription Esophagus oesophagus
10 chr11:73055000-73072800 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr11:73055000-73072800 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr11:73055200-73063800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr11:73055800-73066800 Weak transcription Colonic Mucosa Colon
14 chr11:73055800-73068400 Weak transcription NH-A brain
15 chr11:73055800-73071800 Weak transcription Brain Substantia Nigra brain
16 chr11:73056000-73072200 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr11:73056000-73077200 Weak transcription Right Atrium heart
18 chr11:73056200-73064200 Weak transcription NHDF-Ad bronchial
19 chr11:73056200-73066600 Weak transcription Brain Angular Gyrus brain
20 chr11:73058000-73071200 Weak transcription Duodenum Mucosa Duodenum
21 chr11:73058400-73065800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr11:73058800-73064400 Weak transcription HSMMtube muscle
23 chr11:73059000-73074000 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr11:73059200-73063600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr11:73059200-73063800 Weak transcription Placenta Amnion Placenta Amnion
26 chr11:73059200-73071400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr11:73059200-73087400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr11:73059600-73063800 Weak transcription Colon Smooth Muscle Colon
29 chr11:73059600-73063800 Weak transcription Fetal Lung lung
30 chr11:73059600-73063800 Weak transcription HSMM muscle
31 chr11:73059600-73070400 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr11:73059800-73063400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr11:73059800-73063600 Weak transcription Spleen Spleen
34 chr11:73059800-73068600 Weak transcription Primary hematopoietic stem cells blood
35 chr11:73059800-73083000 Weak transcription Fetal Heart heart
36 chr11:73060200-73063600 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr11:73060200-73063800 Weak transcription Left Ventricle heart
38 chr11:73060200-73064000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr11:73060200-73065800 Weak transcription Rectal Smooth Muscle rectum
40 chr11:73060200-73066400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr11:73060200-73066400 Weak transcription Gastric stomach
42 chr11:73060200-73077000 Weak transcription GM12878-XiMat blood
43 chr11:73060400-73063400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr11:73060400-73063800 Weak transcription Brain Germinal Matrix brain
45 chr11:73060400-73063800 Weak transcription Lung lung
46 chr11:73060400-73064000 Weak transcription Fetal Brain Female brain
47 chr11:73060600-73064200 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr11:73060800-73063600 Weak transcription Ovary ovary
49 chr11:73061000-73063600 Weak transcription Aorta Aorta
50 chr11:73061000-73063800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015