Variant report

Variant rs557740
Chromosome Location chr1:10746778-10746779
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr1:10722800-10753000 Weak transcription Primary T cells from cord blood blood
3 chr1:10726400-10750000 Weak transcription Primary B cells from peripheral blood blood
4 chr1:10730400-10752000 Genic enhancers Fetal Intestine Small intestine
5 chr1:10731800-10748400 Weak transcription Primary B cells from cord blood blood
6 chr1:10734200-10747800 Enhancers Fetal Intestine Large intestine
7 chr1:10735000-10751600 Enhancers Lung lung
8 chr1:10736000-10751600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:10737400-10748200 Enhancers HSMMtube muscle
10 chr1:10737600-10752600 Bivalent Enhancer Fetal Stomach stomach
11 chr1:10738000-10753400 Enhancers Stomach Mucosa stomach
12 chr1:10738800-10753000 Enhancers Left Ventricle heart
13 chr1:10739200-10752800 Enhancers Right Atrium heart
14 chr1:10740200-10750200 Enhancers Duodenum Smooth Muscle Duodenum
15 chr1:10741400-10746800 Flanking Active TSS Stomach Smooth Muscle stomach
16 chr1:10741400-10748000 Enhancers Fetal Lung lung
17 chr1:10741400-10748200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:10741400-10749000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:10741800-10753600 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:10741800-10753600 Enhancers Skeletal Muscle Female skeletal muscle
21 chr1:10742200-10747600 Weak transcription Fetal Kidney kidney
22 chr1:10742400-10753200 Enhancers Psoas Muscle Psoas
23 chr1:10742800-10746800 Enhancers Colonic Mucosa Colon
24 chr1:10743000-10747800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:10743000-10752400 Enhancers Right Ventricle heart
26 chr1:10743800-10746800 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr1:10744000-10751400 Enhancers Rectal Smooth Muscle rectum
28 chr1:10744200-10747600 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr1:10744400-10747800 Enhancers Pancreas Pancrea
30 chr1:10744400-10750200 Enhancers Placenta Placenta
31 chr1:10744600-10747200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:10744600-10747800 Enhancers Gastric stomach
33 chr1:10744800-10752800 Enhancers Fetal Heart heart
34 chr1:10745000-10749600 Enhancers Liver Liver
35 chr1:10745000-10753400 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr1:10745200-10748200 Enhancers Ovary ovary
37 chr1:10745400-10747800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:10745400-10748600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
39 chr1:10745400-10752200 Enhancers Rectal Mucosa Donor 31 rectum
40 chr1:10745600-10747400 Flanking Active TSS HepG2 liver
41 chr1:10745600-10747600 Weak transcription Small Intestine intestine
42 chr1:10745600-10747800 Enhancers Rectal Mucosa Donor 29 rectum
43 chr1:10745600-10748400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:10745600-10750200 Enhancers Sigmoid Colon Sigmoid Colon
45 chr1:10745800-10747000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:10745800-10747200 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr1:10745800-10747200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr1:10745800-10747600 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr1:10745800-10748400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:10745800-10748400 Flanking Active TSS Skeletal Muscle Male skeletal muscle

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