Variant report

Variant rs642262
Chromosome Location chr1:10748742-10748743
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr1:10722800-10753000 Weak transcription Primary T cells from cord blood blood
3 chr1:10726400-10750000 Weak transcription Primary B cells from peripheral blood blood
4 chr1:10730400-10752000 Genic enhancers Fetal Intestine Small intestine
5 chr1:10735000-10751600 Enhancers Lung lung
6 chr1:10736000-10751600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr1:10737600-10752600 Bivalent Enhancer Fetal Stomach stomach
8 chr1:10738000-10753400 Enhancers Stomach Mucosa stomach
9 chr1:10738800-10753000 Enhancers Left Ventricle heart
10 chr1:10739200-10752800 Enhancers Right Atrium heart
11 chr1:10740200-10750200 Enhancers Duodenum Smooth Muscle Duodenum
12 chr1:10741400-10749000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:10741800-10753600 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:10741800-10753600 Enhancers Skeletal Muscle Female skeletal muscle
15 chr1:10742400-10753200 Enhancers Psoas Muscle Psoas
16 chr1:10743000-10752400 Enhancers Right Ventricle heart
17 chr1:10744000-10751400 Enhancers Rectal Smooth Muscle rectum
18 chr1:10744400-10750200 Enhancers Placenta Placenta
19 chr1:10744800-10752800 Enhancers Fetal Heart heart
20 chr1:10745000-10749600 Enhancers Liver Liver
21 chr1:10745000-10753400 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr1:10745400-10752200 Enhancers Rectal Mucosa Donor 31 rectum
23 chr1:10745600-10750200 Enhancers Sigmoid Colon Sigmoid Colon
24 chr1:10746000-10749200 Enhancers Adipose Nuclei Adipose
25 chr1:10746000-10750600 Enhancers Primary T cells fromperipheralblood blood
26 chr1:10746200-10750800 Genic enhancers Esophagus oesophagus
27 chr1:10746400-10751800 Genic enhancers Fetal Muscle Leg muscle
28 chr1:10746600-10750000 Weak transcription NHEK skin
29 chr1:10746600-10751600 Weak transcription Fetal Thymus thymus
30 chr1:10746600-10752000 Weak transcription Thymus Thymus
31 chr1:10746600-10752200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:10747000-10749200 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr1:10747000-10752200 Weak transcription HMEC breast
34 chr1:10747000-10752800 Enhancers Colonic Mucosa Colon
35 chr1:10747000-10753800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:10747200-10749000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
37 chr1:10747400-10748800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:10747600-10750400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:10747600-10750600 Enhancers Primary neutrophils fromperipheralblood blood
40 chr1:10747600-10752600 Weak transcription Hela-S3 cervix
41 chr1:10747800-10749400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:10747800-10749600 Weak transcription HepG2 liver
43 chr1:10747800-10749800 Enhancers Duodenum Mucosa Duodenum
44 chr1:10747800-10750200 Genic enhancers Gastric stomach
45 chr1:10747800-10750400 Enhancers Primary hematopoietic stem cells blood
46 chr1:10747800-10750400 Genic enhancers Fetal Intestine Large intestine
47 chr1:10747800-10753000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:10747800-10753600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr1:10748000-10749400 Enhancers Rectal Mucosa Donor 29 rectum
50 chr1:10748000-10751400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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