Variant report

Variant rs60400988
Chromosome Location chr1:10734567-10734568
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr1:10712600-10737000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:10722800-10753000 Weak transcription Primary T cells from cord blood blood
4 chr1:10724200-10743200 Enhancers Fetal Heart heart
5 chr1:10725600-10736600 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:10725600-10739200 Weak transcription Thymus Thymus
7 chr1:10726400-10741600 Weak transcription Brain Hippocampus Middle brain
8 chr1:10726400-10750000 Weak transcription Primary B cells from peripheral blood blood
9 chr1:10727200-10735400 Enhancers Rectal Smooth Muscle rectum
10 chr1:10727600-10735800 Weak transcription Esophagus oesophagus
11 chr1:10729000-10739400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:10729000-10739400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:10729200-10734800 Weak transcription Aorta Aorta
14 chr1:10729200-10736400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:10729200-10737400 Weak transcription Psoas Muscle Psoas
16 chr1:10729800-10734600 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr1:10730400-10752000 Genic enhancers Fetal Intestine Small intestine
18 chr1:10730800-10735600 Enhancers Brain Germinal Matrix brain
19 chr1:10731000-10736800 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:10731400-10736600 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr1:10731400-10737000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:10731400-10744000 Enhancers Rectal Mucosa Donor 31 rectum
23 chr1:10731600-10743200 Weak transcription Small Intestine intestine
24 chr1:10731800-10748400 Weak transcription Primary B cells from cord blood blood
25 chr1:10732000-10736000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr1:10732000-10736600 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr1:10732000-10739400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:10732200-10734600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:10732200-10735200 Weak transcription Placenta Placenta
30 chr1:10732200-10739800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:10732600-10734600 Enhancers Colonic Mucosa Colon
32 chr1:10732600-10736000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:10733200-10735200 Flanking Active TSS Stomach Smooth Muscle stomach
34 chr1:10733400-10736400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:10733400-10738400 Enhancers Left Ventricle heart
36 chr1:10733400-10742400 Enhancers Right Ventricle heart
37 chr1:10733600-10737200 Enhancers Colon Smooth Muscle Colon
38 chr1:10733600-10741600 Enhancers Skeletal Muscle Female skeletal muscle
39 chr1:10733800-10734600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:10733800-10734600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:10733800-10735800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:10733800-10737400 Bivalent Enhancer Fetal Stomach stomach
43 chr1:10733800-10738400 Enhancers Pancreas Pancrea
44 chr1:10733800-10738400 Enhancers Rectal Mucosa Donor 29 rectum
45 chr1:10733800-10739600 Enhancers Duodenum Smooth Muscle Duodenum
46 chr1:10733800-10742400 Enhancers Skeletal Muscle Male skeletal muscle
47 chr1:10734000-10735000 Genic enhancers Lung lung
48 chr1:10734000-10736200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:10734000-10737000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:10734000-10737400 Weak transcription Fetal Kidney kidney

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