Variant report

Variant rs543678
Chromosome Location chr1:10743177-10743178
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr1:10722800-10753000 Weak transcription Primary T cells from cord blood blood
3 chr1:10724200-10743200 Enhancers Fetal Heart heart
4 chr1:10726400-10750000 Weak transcription Primary B cells from peripheral blood blood
5 chr1:10730400-10752000 Genic enhancers Fetal Intestine Small intestine
6 chr1:10731400-10744000 Enhancers Rectal Mucosa Donor 31 rectum
7 chr1:10731600-10743200 Weak transcription Small Intestine intestine
8 chr1:10731800-10748400 Weak transcription Primary B cells from cord blood blood
9 chr1:10734200-10747800 Enhancers Fetal Intestine Large intestine
10 chr1:10735000-10751600 Enhancers Lung lung
11 chr1:10735200-10743400 Enhancers Placenta Placenta
12 chr1:10736000-10743800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr1:10736000-10751600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr1:10736200-10744200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:10736400-10743600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
16 chr1:10736600-10744200 Enhancers HUES6 Cell Line embryonic stem cell
17 chr1:10737400-10748200 Enhancers HSMMtube muscle
18 chr1:10737600-10752600 Bivalent Enhancer Fetal Stomach stomach
19 chr1:10738000-10744000 Enhancers Duodenum Mucosa Duodenum
20 chr1:10738000-10753400 Enhancers Stomach Mucosa stomach
21 chr1:10738800-10743800 Enhancers Pancreas Pancrea
22 chr1:10738800-10743800 Enhancers Rectal Mucosa Donor 29 rectum
23 chr1:10738800-10753000 Enhancers Left Ventricle heart
24 chr1:10739000-10743600 Enhancers Gastric stomach
25 chr1:10739200-10752800 Enhancers Right Atrium heart
26 chr1:10739400-10743800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
27 chr1:10740000-10743200 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:10740200-10743600 Weak transcription Thymus Thymus
29 chr1:10740200-10744600 Weak transcription Fetal Thymus thymus
30 chr1:10740200-10746000 Weak transcription Primary T cells fromperipheralblood blood
31 chr1:10740200-10750200 Enhancers Duodenum Smooth Muscle Duodenum
32 chr1:10740800-10743400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:10740800-10746000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:10740800-10746000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr1:10741000-10746600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:10741200-10743200 Enhancers Liver Liver
37 chr1:10741200-10743800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:10741200-10743800 Weak transcription K562 blood
39 chr1:10741200-10744800 Bivalent Enhancer Fetal Muscle Leg muscle
40 chr1:10741400-10746800 Flanking Active TSS Stomach Smooth Muscle stomach
41 chr1:10741400-10748000 Enhancers Fetal Lung lung
42 chr1:10741400-10748200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:10741400-10749000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:10741600-10743800 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr1:10741600-10744000 Enhancers H1 Cell Line embryonic stem cell
46 chr1:10741600-10744000 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr1:10741600-10745600 Enhancers Fetal Muscle Trunk muscle
48 chr1:10741600-10746200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:10741600-10746400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:10741800-10744000 Enhancers iPS-20b Cell Line embryonic stem cell

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