Variant report

Variant rs474404
Chromosome Location chr1:10741426-10741427
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr1:10722800-10753000 Weak transcription Primary T cells from cord blood blood
3 chr1:10724200-10743200 Enhancers Fetal Heart heart
4 chr1:10726400-10741600 Weak transcription Brain Hippocampus Middle brain
5 chr1:10726400-10750000 Weak transcription Primary B cells from peripheral blood blood
6 chr1:10730400-10752000 Genic enhancers Fetal Intestine Small intestine
7 chr1:10731400-10744000 Enhancers Rectal Mucosa Donor 31 rectum
8 chr1:10731600-10743200 Weak transcription Small Intestine intestine
9 chr1:10731800-10748400 Weak transcription Primary B cells from cord blood blood
10 chr1:10733400-10742400 Enhancers Right Ventricle heart
11 chr1:10733600-10741600 Enhancers Skeletal Muscle Female skeletal muscle
12 chr1:10733800-10742400 Enhancers Skeletal Muscle Male skeletal muscle
13 chr1:10734200-10747800 Enhancers Fetal Intestine Large intestine
14 chr1:10735000-10751600 Enhancers Lung lung
15 chr1:10735200-10743400 Enhancers Placenta Placenta
16 chr1:10735400-10741600 Bivalent Enhancer Fetal Muscle Trunk muscle
17 chr1:10736000-10743800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr1:10736000-10751600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr1:10736200-10744200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:10736400-10743600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr1:10736600-10744200 Enhancers HUES6 Cell Line embryonic stem cell
22 chr1:10737400-10741600 Enhancers Psoas Muscle Psoas
23 chr1:10737400-10748200 Enhancers HSMMtube muscle
24 chr1:10737600-10752600 Bivalent Enhancer Fetal Stomach stomach
25 chr1:10738000-10741600 Weak transcription Fetal Kidney kidney
26 chr1:10738000-10744000 Enhancers Duodenum Mucosa Duodenum
27 chr1:10738000-10753400 Enhancers Stomach Mucosa stomach
28 chr1:10738200-10742200 Enhancers Colonic Mucosa Colon
29 chr1:10738800-10743800 Enhancers Pancreas Pancrea
30 chr1:10738800-10743800 Enhancers Rectal Mucosa Donor 29 rectum
31 chr1:10738800-10753000 Enhancers Left Ventricle heart
32 chr1:10739000-10742000 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:10739000-10743600 Enhancers Gastric stomach
34 chr1:10739200-10752800 Enhancers Right Atrium heart
35 chr1:10739400-10741600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:10739400-10741600 Enhancers Sigmoid Colon Sigmoid Colon
37 chr1:10739400-10743800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
38 chr1:10739600-10742400 Weak transcription Brain Germinal Matrix brain
39 chr1:10739600-10742400 Flanking Active TSS HepG2 liver
40 chr1:10739800-10741800 Enhancers Adipose Nuclei Adipose
41 chr1:10739800-10742000 Enhancers Colon Smooth Muscle Colon
42 chr1:10739800-10743000 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr1:10739800-10743000 Weak transcription Ovary ovary
44 chr1:10740000-10742200 Enhancers Rectal Smooth Muscle rectum
45 chr1:10740000-10743200 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr1:10740200-10741600 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr1:10740200-10742400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:10740200-10743600 Weak transcription Thymus Thymus
49 chr1:10740200-10744600 Weak transcription Fetal Thymus thymus
50 chr1:10740200-10746000 Weak transcription Primary T cells fromperipheralblood blood

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