The 2.0 version of rSNPBase

Variant report

Variant rs55782463
Chromosome Location chr2:56109175-56109176
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:56089200-56112200 Weak transcription Pancreas Pancrea
2 chr2:56092400-56111600 Genic enhancers HUVEC blood vessel
3 chr2:56092800-56112400 Weak transcription Stomach Smooth Muscle stomach
4 chr2:56092800-56114400 Weak transcription Brain Cingulate Gyrus brain
5 chr2:56094800-56116200 Weak transcription Spleen Spleen
6 chr2:56095600-56109600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:56103400-56110000 Weak transcription A549 lung
8 chr2:56103800-56109400 Strong transcription HSMM muscle
9 chr2:56104600-56115000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr2:56105000-56110400 Weak transcription Muscle Satellite Cultured Cells --
11 chr2:56105000-56112600 Weak transcription HSMMtube muscle
12 chr2:56105800-56109200 Strong transcription NHEK skin
13 chr2:56107600-56114400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr2:56107800-56110800 Weak transcription Fetal Lung lung
15 chr2:56107800-56111400 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr2:56107800-56116000 Weak transcription Placenta Amnion Placenta Amnion
17 chr2:56108200-56109200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr2:56108200-56110400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr2:56108200-56110600 Weak transcription Primary monocytes fromperipheralblood blood
20 chr2:56108200-56112800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:56108400-56109600 Weak transcription Hela-S3 cervix
22 chr2:56108400-56110000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr2:56108400-56110000 Weak transcription Ovary ovary
24 chr2:56108400-56110400 Weak transcription Adipose Nuclei Adipose
25 chr2:56108400-56110400 Weak transcription NHDF-Ad bronchial
26 chr2:56108400-56110400 Weak transcription NHLF lung
27 chr2:56108400-56110600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:56108400-56110600 Weak transcription Aorta Aorta
29 chr2:56108400-56114400 Weak transcription Brain Substantia Nigra brain
30 chr2:56108400-56115000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:56108400-56115200 Weak transcription Fetal Kidney kidney
32 chr2:56108400-56116000 Weak transcription Lung lung
33 chr2:56108600-56109800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:56108600-56112800 Weak transcription Placenta Placenta
35 chr2:56108800-56110000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr2:56108800-56110200 Weak transcription NH-A brain
37 chr2:56108800-56111400 Weak transcription Fetal Stomach stomach
38 chr2:56108800-56111600 Weak transcription Right Atrium heart
39 chr2:56108800-56115000 Weak transcription Gastric stomach
40 chr2:56108800-56116200 Weak transcription Brain Anterior Caudate brain
41 chr2:56109000-56109800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:56109000-56110000 Strong transcription Osteobl bone
43 chr2:56109000-56110200 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr2:56109000-56110200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr2:56109000-56110600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr2:56109000-56110600 Weak transcription HMEC breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015