Variant report

Variant rs3791673
Chromosome Location chr2:56113538-56113539
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:56092800-56114400 Weak transcription Brain Cingulate Gyrus brain
2 chr2:56094800-56116200 Weak transcription Spleen Spleen
3 chr2:56104600-56115000 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr2:56107600-56114400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr2:56107800-56116000 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:56108400-56114400 Weak transcription Brain Substantia Nigra brain
7 chr2:56108400-56115000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:56108400-56115200 Weak transcription Fetal Kidney kidney
9 chr2:56108400-56116000 Weak transcription Lung lung
10 chr2:56108800-56115000 Weak transcription Gastric stomach
11 chr2:56108800-56116200 Weak transcription Brain Anterior Caudate brain
12 chr2:56109600-56115000 Enhancers Hela-S3 cervix
13 chr2:56109800-56114200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr2:56109800-56120000 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr2:56110000-56117200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr2:56110200-56116600 Enhancers NH-A brain
17 chr2:56110400-56113600 Enhancers Adipose Nuclei Adipose
18 chr2:56110400-56116600 Enhancers Muscle Satellite Cultured Cells --
19 chr2:56110400-56116600 Enhancers NHLF lung
20 chr2:56110400-56116800 Enhancers NHDF-Ad bronchial
21 chr2:56111200-56116000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:56111400-56113600 Enhancers Monocytes-CD14+_RO01746 blood
23 chr2:56112000-56116000 Genic enhancers HUVEC blood vessel
24 chr2:56112200-56116600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr2:56112200-56116600 Enhancers HMEC breast
26 chr2:56112400-56113600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr2:56112400-56114800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr2:56112400-56115800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr2:56112600-56115000 Weak transcription Aorta Aorta
30 chr2:56112600-56115000 Enhancers Osteobl bone
31 chr2:56112800-56113800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr2:56112800-56113800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr2:56112800-56115000 Enhancers HSMM muscle
34 chr2:56112800-56115400 Enhancers Fetal Lung lung
35 chr2:56113000-56114200 Weak transcription Left Ventricle heart
36 chr2:56113000-56115000 Weak transcription Ovary ovary
37 chr2:56113000-56115000 Weak transcription Pancreas Pancrea
38 chr2:56113000-56115000 Weak transcription Right Atrium heart
39 chr2:56113000-56115800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr2:56113000-56116000 Weak transcription Placenta Placenta
41 chr2:56113200-56113600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:56113200-56114800 Enhancers NHEK skin
43 chr2:56113200-56115000 Weak transcription Stomach Smooth Muscle stomach
44 chr2:56113400-56113600 Enhancers Brain Hippocampus Middle brain
45 chr2:56113400-56113800 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr2:56113400-56115000 Weak transcription HSMMtube muscle
47 chr2:56113400-56116000 Enhancers A549 lung

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