Variant report
| Variant | rs55818621 |
|---|---|
| Chromosome Location | chr2:56101790-56101791 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:56089200-56112200 | Weak transcription | Pancreas | Pancrea |
| 2 | chr2:56090000-56107600 | Weak transcription | Fetal Stomach | stomach |
| 3 | chr2:56090200-56107400 | Weak transcription | Fetal Lung | lung |
| 4 | chr2:56091200-56102600 | Weak transcription | Hela-S3 | cervix |
| 5 | chr2:56092400-56111600 | Genic enhancers | HUVEC | blood vessel |
| 6 | chr2:56092600-56102600 | Strong transcription | HSMM | muscle |
| 7 | chr2:56092800-56107800 | Weak transcription | Brain Anterior Caudate | brain |
| 8 | chr2:56092800-56112400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 9 | chr2:56092800-56114400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 10 | chr2:56093800-56109000 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr2:56094800-56116200 | Weak transcription | Spleen | Spleen |
| 12 | chr2:56095000-56102600 | Weak transcription | A549 | lung |
| 13 | chr2:56095600-56109600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 14 | chr2:56096000-56106000 | Weak transcription | Ovary | ovary |
| 15 | chr2:56097000-56108800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr2:56097400-56102000 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 17 | chr2:56097400-56102400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 18 | chr2:56097600-56102800 | Strong transcription | Adipose Nuclei | Adipose |
| 19 | chr2:56098000-56107600 | Weak transcription | Lung | lung |
| 20 | chr2:56098200-56102600 | Weak transcription | HMEC | breast |
| 21 | chr2:56098600-56102600 | Weak transcription | NH-A | brain |
| 22 | chr2:56098600-56107000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 23 | chr2:56099000-56102600 | Weak transcription | HSMMtube | muscle |
| 24 | chr2:56099000-56102600 | Weak transcription | NHEK | skin |
| 25 | chr2:56099000-56102800 | Weak transcription | Aorta | Aorta |
| 26 | chr2:56099000-56102800 | Weak transcription | Right Atrium | heart |
| 27 | chr2:56099200-56102000 | Weak transcription | NHDF-Ad | bronchial |
| 28 | chr2:56099200-56102800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 29 | chr2:56100800-56102200 | Genic enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 30 | chr2:56101000-56106800 | Weak transcription | Fetal Kidney | kidney |
| 31 | chr2:56101000-56107600 | Weak transcription | Gastric | stomach |
| 32 | chr2:56101200-56102000 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 33 | chr2:56101200-56105800 | Genic enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 34 | chr2:56101200-56106000 | Genic enhancers | Osteobl | bone |
| 35 | chr2:56101400-56102000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 36 | chr2:56101600-56102000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 37 | chr2:56101600-56102000 | Strong transcription | NHLF | lung |
