The 2.0 version of rSNPBase

Variant report

Variant rs6722453
Chromosome Location chr2:56111099-56111100
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:56089200-56112200 Weak transcription Pancreas Pancrea
2 chr2:56092400-56111600 Genic enhancers HUVEC blood vessel
3 chr2:56092800-56112400 Weak transcription Stomach Smooth Muscle stomach
4 chr2:56092800-56114400 Weak transcription Brain Cingulate Gyrus brain
5 chr2:56094800-56116200 Weak transcription Spleen Spleen
6 chr2:56104600-56115000 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr2:56105000-56112600 Weak transcription HSMMtube muscle
8 chr2:56107600-56114400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr2:56107800-56111400 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr2:56107800-56116000 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:56108200-56112800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr2:56108400-56114400 Weak transcription Brain Substantia Nigra brain
13 chr2:56108400-56115000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr2:56108400-56115200 Weak transcription Fetal Kidney kidney
15 chr2:56108400-56116000 Weak transcription Lung lung
16 chr2:56108600-56112800 Weak transcription Placenta Placenta
17 chr2:56108800-56111400 Weak transcription Fetal Stomach stomach
18 chr2:56108800-56111600 Weak transcription Right Atrium heart
19 chr2:56108800-56115000 Weak transcription Gastric stomach
20 chr2:56108800-56116200 Weak transcription Brain Anterior Caudate brain
21 chr2:56109400-56111200 Weak transcription HSMM muscle
22 chr2:56109600-56115000 Enhancers Hela-S3 cervix
23 chr2:56109800-56114200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:56109800-56120000 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:56110000-56111400 Enhancers A549 lung
26 chr2:56110000-56111600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:56110000-56111600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr2:56110000-56111800 Enhancers NHEK skin
29 chr2:56110000-56112400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr2:56110000-56112600 Genic enhancers Osteobl bone
31 chr2:56110000-56113000 Enhancers Ovary ovary
32 chr2:56110000-56117200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:56110200-56111200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr2:56110200-56116600 Enhancers NH-A brain
35 chr2:56110400-56113600 Enhancers Adipose Nuclei Adipose
36 chr2:56110400-56116600 Enhancers Muscle Satellite Cultured Cells --
37 chr2:56110400-56116600 Enhancers NHLF lung
38 chr2:56110400-56116800 Enhancers NHDF-Ad bronchial
39 chr2:56110600-56111200 Enhancers Primary monocytes fromperipheralblood blood
40 chr2:56110600-56111200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr2:56110600-56112600 Genic enhancers Breast Myoepithelial Primary Cells Breast
42 chr2:56110600-56112600 Enhancers Aorta Aorta
43 chr2:56110600-56112800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr2:56110800-56111200 Enhancers Fetal Lung lung
45 chr2:56111000-56112200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr2:56111000-56112200 Weak transcription HMEC breast

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Last update: Aug 31, 2015