Variant report
| Variant | rs55782523 |
|---|---|
| Chromosome Location | chr1:70645450-70645451 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:70601200-70652000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 2 | chr1:70603400-70648800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 3 | chr1:70606800-70651600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 4 | chr1:70606800-70661800 | Weak transcription | Brain Hippocampus Middle | brain |
| 5 | chr1:70607000-70670200 | Weak transcription | Psoas Muscle | Psoas |
| 6 | chr1:70607000-70670400 | Weak transcription | Small Intestine | intestine |
| 7 | chr1:70607200-70652600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 8 | chr1:70607400-70655200 | Weak transcription | Colon Smooth Muscle | Colon |
| 9 | chr1:70608400-70653400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 10 | chr1:70608800-70654800 | Weak transcription | Thymus | Thymus |
| 11 | chr1:70608800-70655800 | Weak transcription | Esophagus | oesophagus |
| 12 | chr1:70609200-70647600 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr1:70609200-70650200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 14 | chr1:70609400-70649800 | Weak transcription | Fetal Brain Male | brain |
| 15 | chr1:70609600-70661200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr1:70610000-70656600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 17 | chr1:70610000-70667800 | Weak transcription | HepG2 | liver |
| 18 | chr1:70610400-70650200 | Weak transcription | GM12878-XiMat | blood |
| 19 | chr1:70610400-70653600 | Weak transcription | Gastric | stomach |
| 20 | chr1:70610600-70669600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 21 | chr1:70611000-70666600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 22 | chr1:70611200-70670400 | Weak transcription | Pancreas | Pancrea |
| 23 | chr1:70611400-70652800 | Weak transcription | Spleen | Spleen |
| 24 | chr1:70612400-70669000 | Weak transcription | HUVEC | blood vessel |
| 25 | chr1:70613000-70649200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 26 | chr1:70613400-70658400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 27 | chr1:70613600-70657000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 28 | chr1:70613600-70667800 | Weak transcription | Brain Angular Gyrus | brain |
| 29 | chr1:70613800-70649200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 30 | chr1:70613800-70658000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 31 | chr1:70614400-70651000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 32 | chr1:70614400-70657800 | Weak transcription | Fetal Kidney | kidney |
| 33 | chr1:70615000-70670000 | Weak transcription | NH-A | brain |
| 34 | chr1:70615000-70670400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 35 | chr1:70615200-70649200 | Weak transcription | Left Ventricle | heart |
| 36 | chr1:70616400-70649200 | Weak transcription | Fetal Lung | lung |
| 37 | chr1:70617200-70646000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 38 | chr1:70622600-70651400 | Weak transcription | HMEC | breast |
| 39 | chr1:70623000-70656600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 40 | chr1:70623000-70661600 | Weak transcription | K562 | blood |
| 41 | chr1:70623200-70652000 | Weak transcription | Osteobl | bone |
| 42 | chr1:70623600-70646000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 43 | chr1:70624000-70650200 | Weak transcription | Hela-S3 | cervix |
| 44 | chr1:70624200-70648600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 45 | chr1:70626800-70649800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 46 | chr1:70628200-70645600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr1:70629800-70669600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 48 | chr1:70632600-70656800 | Weak transcription | NHLF | lung |
| 49 | chr1:70634000-70670400 | Weak transcription | Lung | lung |
| 50 | chr1:70634200-70658000 | Weak transcription | Brain Germinal Matrix | brain |
