Variant report

Variant	rs61784318
Chromosome Location	chr1:70593831-70593832
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:70584648..70587112-chr1:70591147..70593894,2	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs17131207	0.83[EUR][1000 genomes]
rs17131212	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17131214	0.83[EUR][1000 genomes]
rs17131217	0.83[EUR][1000 genomes]
rs17131223	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17357463	0.95[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs28537484	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3738119	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3767209	0.90[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs3767210	0.95[AMR][1000 genomes]
rs3767211	0.95[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs41287888	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs487613	0.95[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs55634563	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55782523	0.95[AMR][1000 genomes]
rs55970826	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56200611	0.95[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs61784297	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs61784315	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61784317	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61784319	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61784320	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61785271	0.95[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs61785280	0.85[AMR][1000 genomes]
rs6678316	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6696040	0.95[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7518536	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7553993	0.81[AMR][1000 genomes]
rs9970462	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9970998	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531879	chr1:70386455-70644617	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:70557000-70599600	Weak transcription	Fetal Brain Female	brain
2	chr1:70583800-70599600	Weak transcription	Fetal Heart	heart
3	chr1:70588400-70599000	Weak transcription	Brain Germinal Matrix	brain
4	chr1:70592600-70595800	Weak transcription	Fetal Stomach	stomach

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