Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:56491622..56494953-chr3:56496657..56498979,3	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10510786	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11708250	1.00[ASN][1000 genomes]
rs11712094	0.94[ASN][1000 genomes]
rs11715404	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11719646	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11923602	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1352765	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1388254	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17056833	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17825463	1.00[ASN][1000 genomes]
rs17825487	0.86[AMR][1000 genomes]
rs55801834	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55833786	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57164168	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57352922	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6800117	0.84[AMR][1000 genomes]
rs6801539	0.92[ASN][1000 genomes]
rs72875310	0.91[ASN][1000 genomes]
rs72875345	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7611444	0.84[AMR][1000 genomes]
rs7625995	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7651181	0.84[AMR][1000 genomes]
rs923653	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3347557	chr3:56466500-56619322	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56493200-56500200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr3:56493200-56500800	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr3:56493200-56501200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr3:56493600-56500600	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr3:56494000-56500800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr3:56494200-56500800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr3:56494200-56500800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr3:56495000-56501000	Weak transcription	Gastric	stomach

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