Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:56475922..56478879-chr3:56492161..56494889,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10510786	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11708250	0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11712094	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11715404	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11719646	0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11923602	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1352765	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1388254	0.96[ASN][1000 genomes]
rs17056833	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17825463	0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17825487	0.83[EUR][1000 genomes]
rs55783589	0.92[ASN][1000 genomes]
rs55801834	0.92[ASN][1000 genomes]
rs55833786	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57164168	0.92[ASN][1000 genomes]
rs57352922	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6800117	0.82[EUR][1000 genomes]
rs72875310	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72875345	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7611444	0.82[EUR][1000 genomes]
rs7625995	0.96[ASN][1000 genomes]
rs7651181	0.82[EUR][1000 genomes]
rs923653	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3383044	chr3:56466497-56483664	Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3347557	chr3:56466500-56619322	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56456400-56479600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:56469000-56479400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr3:56469000-56481000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr3:56469000-56492600	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr3:56475400-56478600	Weak transcription	Fetal Heart	heart
6	chr3:56477800-56478000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr3:56477800-56479000	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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