Variant report

Variant rs55788982
Chromosome Location chr14:71028937-71028938
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:70988000-71029800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr14:70990400-71029600 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr14:70999800-71029200 Weak transcription Brain Anterior Caudate brain
4 chr14:70999800-71030200 Weak transcription Brain Angular Gyrus brain
5 chr14:71004000-71030200 Weak transcription Rectal Smooth Muscle rectum
6 chr14:71004200-71034600 Weak transcription Brain Substantia Nigra brain
7 chr14:71004400-71029800 Weak transcription Brain Inferior Temporal Lobe brain
8 chr14:71004400-71030000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr14:71007000-71029200 Weak transcription Primary T cells fromperipheralblood blood
10 chr14:71010800-71029000 Weak transcription Fetal Lung lung
11 chr14:71020000-71029200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr14:71020800-71032000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr14:71022800-71029200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr14:71022800-71029400 Weak transcription HSMM muscle
15 chr14:71022800-71047000 Weak transcription Muscle Satellite Cultured Cells --
16 chr14:71023000-71029000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr14:71023000-71045800 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr14:71023200-71029200 Weak transcription Osteobl bone
19 chr14:71023200-71029800 Weak transcription Left Ventricle heart
20 chr14:71023200-71029800 Weak transcription Right Ventricle heart
21 chr14:71023200-71034000 Weak transcription NHEK skin
22 chr14:71023200-71050400 Weak transcription Gastric stomach
23 chr14:71025400-71030200 Weak transcription HSMMtube muscle
24 chr14:71025400-71047600 Weak transcription NH-A brain
25 chr14:71026400-71030200 Weak transcription Psoas Muscle Psoas
26 chr14:71026400-71047000 Weak transcription Colon Smooth Muscle Colon
27 chr14:71026800-71035200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr14:71027400-71029200 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr14:71027400-71029400 ZNF genes & repeats Primary B cells from peripheral blood blood
30 chr14:71027400-71031000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr14:71027400-71047200 Weak transcription NHLF lung
32 chr14:71027600-71029600 Weak transcription Fetal Kidney kidney
33 chr14:71027600-71032000 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr14:71027800-71034200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr14:71028000-71029000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
36 chr14:71028000-71029000 ZNF genes & repeats Liver Liver
37 chr14:71028000-71030800 Strong transcription Skeletal Muscle Male skeletal muscle
38 chr14:71028000-71031200 ZNF genes & repeats Primary B cells from cord blood blood
39 chr14:71028000-71032800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
40 chr14:71028200-71029000 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
41 chr14:71028200-71029000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
42 chr14:71028200-71029000 ZNF genes & repeats Duodenum Mucosa Duodenum
43 chr14:71028200-71029000 ZNF genes & repeats Esophagus oesophagus
44 chr14:71028200-71029000 ZNF genes & repeats Fetal Stomach stomach
45 chr14:71028200-71029200 ZNF genes & repeats Fetal Muscle Trunk muscle
46 chr14:71028200-71029400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr14:71028200-71029400 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
48 chr14:71028200-71029400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
49 chr14:71028200-71029400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
50 chr14:71028200-71029400 ZNF genes & repeats Brain Germinal Matrix brain

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