Variant report

Variant	rs55791507
Chromosome Location	chr8:119825002-119825003
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11985420	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1948468	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56066811	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56268043	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57800698	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58035109	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58191749	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58235246	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61475380	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73709004	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73709005	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73709006	1.00[AMR][1000 genomes]
rs73709007	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73709009	1.00[AMR][1000 genomes]
rs73709011	1.00[AMR][1000 genomes]
rs73709013	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73709015	1.00[AMR][1000 genomes]
rs73709018	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73709019	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891414	chr8:119755490-119881550	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119820000-119825200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr8:119824400-119825600	Enhancers	Fetal Lung	lung
3	chr8:119824400-119827600	Weak transcription	Aorta	Aorta
4	chr8:119824800-119825800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr8:119825000-119827800	Weak transcription	NHLF	lung
6	chr8:119825000-119836400	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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