The 2.0 version of rSNPBase

Variant report

Variant rs55793049
Chromosome Location chr4:106134942-106134943
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106101000-106146600 Weak transcription Spleen Spleen
2 chr4:106106000-106135000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:106106200-106155000 Weak transcription Primary T cells fromperipheralblood blood
4 chr4:106113000-106154800 Weak transcription Fetal Thymus thymus
5 chr4:106113200-106136000 Weak transcription Brain Anterior Caudate brain
6 chr4:106113200-106136000 Weak transcription Brain Substantia Nigra brain
7 chr4:106113200-106136800 Weak transcription Fetal Kidney kidney
8 chr4:106113200-106146600 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr4:106113600-106136000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr4:106113600-106173800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr4:106113600-106195800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr4:106114400-106136200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr4:106114400-106155200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr4:106114600-106136000 Weak transcription Pancreas Pancrea
15 chr4:106114600-106145400 Weak transcription Adipose Nuclei Adipose
16 chr4:106114600-106155600 Weak transcription Esophagus oesophagus
17 chr4:106117600-106136000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr4:106118000-106136200 Weak transcription Brain Hippocampus Middle brain
19 chr4:106118000-106136800 Weak transcription HSMMtube muscle
20 chr4:106118000-106155400 Weak transcription Duodenum Mucosa Duodenum
21 chr4:106118200-106135600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr4:106118400-106135800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr4:106118800-106135000 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr4:106118800-106136000 Weak transcription NH-A brain
25 chr4:106118800-106136800 Weak transcription Fetal Intestine Large intestine
26 chr4:106118800-106136800 Weak transcription Rectal Smooth Muscle rectum
27 chr4:106118800-106137000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr4:106118800-106155000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr4:106118800-106155200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr4:106119000-106135800 Weak transcription HSMM muscle
31 chr4:106120000-106135600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr4:106120000-106135800 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr4:106120000-106136400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr4:106122200-106137200 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr4:106124200-106136600 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr4:106124400-106136400 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr4:106124400-106137000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr4:106124800-106136400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr4:106127600-106136000 Weak transcription Brain Inferior Temporal Lobe brain
40 chr4:106127600-106146600 Weak transcription Left Ventricle heart
41 chr4:106127600-106155000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr4:106127600-106155400 Weak transcription Placenta Placenta
43 chr4:106127800-106135000 Weak transcription Fetal Muscle Trunk muscle
44 chr4:106127800-106135000 Weak transcription Fetal Stomach stomach
45 chr4:106127800-106136000 Weak transcription Psoas Muscle Psoas
46 chr4:106127800-106144800 Weak transcription Ovary ovary
47 chr4:106127800-106145200 Weak transcription Fetal Heart heart
48 chr4:106127800-106155200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr4:106127800-106155200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr4:106128000-106135200 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015