The 2.0 version of rSNPBase

Variant report

Variant rs55803709
Chromosome Location chr4:122756274-122756275
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:122745400-122767200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr4:122745400-122777600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:122745400-122790400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr4:122745400-122790600 Weak transcription Small Intestine intestine
5 chr4:122745600-122758000 Weak transcription Colon Smooth Muscle Colon
6 chr4:122745600-122758600 Weak transcription Fetal Kidney kidney
7 chr4:122745600-122759800 Weak transcription Fetal Thymus thymus
8 chr4:122745600-122760400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr4:122745600-122762000 Weak transcription Aorta Aorta
10 chr4:122745600-122764000 Weak transcription Colonic Mucosa Colon
11 chr4:122745600-122766200 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr4:122745600-122766600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr4:122745600-122767200 Weak transcription Esophagus oesophagus
14 chr4:122745600-122767200 Weak transcription Right Ventricle heart
15 chr4:122745600-122767800 Weak transcription Pancreas Pancrea
16 chr4:122745600-122767800 Weak transcription Thymus Thymus
17 chr4:122745600-122769200 Weak transcription Hela-S3 cervix
18 chr4:122745600-122770000 Weak transcription Primary B cells from peripheral blood blood
19 chr4:122745600-122781600 Weak transcription Placenta Placenta
20 chr4:122745600-122790400 Weak transcription H1 Cell Line embryonic stem cell
21 chr4:122745600-122790600 Weak transcription H9 Cell Line embryonic stem cell
22 chr4:122745600-122790800 Weak transcription Psoas Muscle Psoas
23 chr4:122745800-122758000 Weak transcription Fetal Muscle Leg muscle
24 chr4:122745800-122758400 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr4:122745800-122758800 Weak transcription HUVEC blood vessel
26 chr4:122745800-122759800 Weak transcription Primary hematopoietic stem cells blood
27 chr4:122745800-122761600 Weak transcription Brain Substantia Nigra brain
28 chr4:122745800-122764000 Weak transcription Brain Hippocampus Middle brain
29 chr4:122745800-122765600 Weak transcription Primary monocytes fromperipheralblood blood
30 chr4:122745800-122765600 Weak transcription Fetal Heart heart
31 chr4:122745800-122766600 Weak transcription Fetal Brain Male brain
32 chr4:122745800-122766600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr4:122745800-122766800 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr4:122745800-122767200 Weak transcription HSMMtube muscle
35 chr4:122745800-122767400 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr4:122745800-122768600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr4:122745800-122770200 Weak transcription GM12878-XiMat blood
38 chr4:122745800-122772000 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr4:122745800-122779200 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr4:122745800-122781200 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr4:122745800-122786800 Weak transcription A549 lung
42 chr4:122745800-122790200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr4:122745800-122790400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr4:122745800-122790400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr4:122745800-122790400 Weak transcription Rectal Smooth Muscle rectum
46 chr4:122745800-122790800 Weak transcription Placenta Amnion Placenta Amnion
47 chr4:122747400-122761000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr4:122748000-122756600 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr4:122748400-122762800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr4:122749200-122764600 Weak transcription NH-A brain

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Last update: Aug 31, 2015