Variant report

Variant	rs55815836
Chromosome Location	chr2:74102327-74102328
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:74097431..74099380-chr2:74100945..74102785,2	K562	blood:
2	chr2:74097880..74100787-chr2:74100945..74103812,3	K562	blood:

rs_ID	r²[population]
rs10169994	1.00[EUR][1000 genomes]
rs10192291	1.00[EUR][1000 genomes]
rs11126418	1.00[EUR][1000 genomes]
rs11885982	0.83[EUR][1000 genomes]
rs11888468	1.00[EUR][1000 genomes]
rs11890343	0.94[EUR][1000 genomes]
rs11904306	1.00[EUR][1000 genomes]
rs13402321	1.00[EUR][1000 genomes]
rs13409194	1.00[EUR][1000 genomes]
rs56055081	0.97[EUR][1000 genomes]
rs59098607	0.83[EUR][1000 genomes]
rs6720781	1.00[EUR][1000 genomes]
rs7570391	1.00[EUR][1000 genomes]
rs7596123	0.94[EUR][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74092800-74104600	Weak transcription	Hela-S3	cervix
2	chr2:74094200-74103400	Weak transcription	Fetal Thymus	thymus
3	chr2:74094200-74104000	Weak transcription	NHEK	skin
4	chr2:74094200-74104200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr2:74094200-74104400	Weak transcription	K562	blood
6	chr2:74094200-74104600	Weak transcription	Duodenum Mucosa	Duodenum
7	chr2:74094400-74103000	Weak transcription	Primary B cells from peripheral blood	blood
8	chr2:74094400-74103800	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr2:74094400-74104000	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr2:74094400-74104200	Weak transcription	Primary neutrophils fromperipheralblood	blood
11	chr2:74094400-74104600	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr2:74094800-74104600	Weak transcription	GM12878-XiMat	blood
13	chr2:74097600-74102600	Weak transcription	Brain Hippocampus Middle	brain
14	chr2:74097600-74114600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr2:74097800-74104200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr2:74098000-74103200	Weak transcription	Placenta	Placenta
17	chr2:74098000-74104000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr2:74098000-74104200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr2:74098000-74104600	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr2:74098400-74104200	Weak transcription	Fetal Muscle Leg	muscle
21	chr2:74099800-74103400	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr2:74099800-74104000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr2:74100000-74104200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr2:74100400-74103200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr2:74100600-74104800	Weak transcription	Adipose Nuclei	Adipose
26	chr2:74101000-74104000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
27	chr2:74101400-74102800	Weak transcription	Rectal Smooth Muscle	rectum
28	chr2:74101400-74103800	Weak transcription	Stomach Smooth Muscle	stomach
29	chr2:74101600-74104200	Enhancers	Colon Smooth Muscle	Colon
30	chr2:74101800-74103000	Enhancers	HepG2	liver

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