The 2.0 version of rSNPBase

Variant report

Variant rs55816734
Chromosome Location chr2:233933846-233933847
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:233928800-233934200 Genic enhancers Primary B cells from peripheral blood blood
2 chr2:233929000-233936000 Genic enhancers Primary T cells fromperipheralblood blood
3 chr2:233929000-233939800 Weak transcription Left Ventricle heart
4 chr2:233929000-233940200 Weak transcription Gastric stomach
5 chr2:233929200-233940000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr2:233929800-233934000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr2:233929800-233935400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
8 chr2:233930800-233934000 Genic enhancers Spleen Spleen
9 chr2:233930800-233934600 Genic enhancers Primary T helper naive cells from peripheral blood blood
10 chr2:233931000-233935800 Enhancers Primary T killer naive cells fromperipheralblood blood
11 chr2:233931800-233934000 Genic enhancers Monocytes-CD14+_RO01746 blood
12 chr2:233932000-233935400 Weak transcription Dnd41 blood
13 chr2:233932000-233936200 Enhancers Primary neutrophils fromperipheralblood blood
14 chr2:233932200-233934200 Genic enhancers Primary T cells from cord blood blood
15 chr2:233932200-233936000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr2:233932200-233937600 Weak transcription K562 blood
17 chr2:233932400-233934000 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr2:233932400-233940200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr2:233932600-233934000 Enhancers Primary monocytes fromperipheralblood blood
20 chr2:233932600-233934000 Genic enhancers Primary hematopoietic stem cells short term culture blood
21 chr2:233932600-233935400 Enhancers Primary T helper cells fromperipheralblood blood
22 chr2:233932600-233937600 Weak transcription Stomach Mucosa stomach
23 chr2:233932600-233939600 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr2:233932600-233940400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr2:233932800-233936400 Weak transcription HepG2 liver
26 chr2:233933200-233934000 Genic enhancers Primary T helper naive cells fromperipheralblood blood
27 chr2:233933200-233934000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
28 chr2:233933200-233934000 Enhancers Adipose Nuclei Adipose
29 chr2:233933200-233934800 Transcr. at gene 5' and 3' GM12878-XiMat blood
30 chr2:233933200-233935600 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr2:233933400-233934000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
32 chr2:233933400-233934000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr2:233933400-233934000 Enhancers Duodenum Mucosa Duodenum
34 chr2:233933400-233934000 Enhancers Thymus Thymus
35 chr2:233933600-233934000 Enhancers Colonic Mucosa Colon
36 chr2:233933600-233934000 Strong transcription Fetal Thymus thymus
37 chr2:233933600-233934000 Enhancers Lung lung
38 chr2:233933600-233935400 Enhancers Primary hematopoietic stem cells blood
39 chr2:233933600-233939000 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:233933800-233934200 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
41 chr2:233933800-233935800 Enhancers Primary T helper cells PMA-I stimulated --
42 chr2:233933800-233937600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr2:233933800-233938800 Weak transcription Placenta Placenta

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015