The 2.0 version of rSNPBase

Variant report

Variant rs72982239
Chromosome Location chr2:233932658-233932659
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:233928200-233933400 Weak transcription Right Ventricle heart
2 chr2:233928800-233932800 Weak transcription Fetal Intestine Small intestine
3 chr2:233928800-233933800 Genic enhancers Primary B cells from cord blood blood
4 chr2:233928800-233934200 Genic enhancers Primary B cells from peripheral blood blood
5 chr2:233929000-233936000 Genic enhancers Primary T cells fromperipheralblood blood
6 chr2:233929000-233939800 Weak transcription Left Ventricle heart
7 chr2:233929000-233940200 Weak transcription Gastric stomach
8 chr2:233929200-233933600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr2:233929200-233933600 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr2:233929200-233940000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr2:233929400-233933200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr2:233929400-233933600 Weak transcription Lung lung
13 chr2:233929600-233933800 Genic enhancers Primary T helper cells PMA-I stimulated --
14 chr2:233929800-233932800 Strong transcription Fetal Thymus thymus
15 chr2:233929800-233933600 Weak transcription Fetal Muscle Leg muscle
16 chr2:233929800-233934000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr2:233929800-233935400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
18 chr2:233930000-233933200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chr2:233930000-233933200 Weak transcription Adipose Nuclei Adipose
20 chr2:233930000-233933400 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr2:233930000-233933600 Weak transcription Colonic Mucosa Colon
22 chr2:233930200-233933400 Weak transcription Duodenum Mucosa Duodenum
23 chr2:233930800-233932800 Strong transcription Primary hematopoietic stem cells blood
24 chr2:233930800-233934000 Genic enhancers Spleen Spleen
25 chr2:233930800-233934600 Genic enhancers Primary T helper naive cells from peripheral blood blood
26 chr2:233931000-233932800 Enhancers NHEK skin
27 chr2:233931000-233935800 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr2:233931200-233932800 Enhancers HepG2 liver
29 chr2:233931200-233932800 Enhancers HMEC breast
30 chr2:233931600-233932800 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr2:233931800-233932800 Transcr. at gene 5' and 3' GM12878-XiMat blood
32 chr2:233931800-233934000 Genic enhancers Monocytes-CD14+_RO01746 blood
33 chr2:233932000-233933400 Weak transcription Thymus Thymus
34 chr2:233932000-233935400 Weak transcription Dnd41 blood
35 chr2:233932000-233936200 Enhancers Primary neutrophils fromperipheralblood blood
36 chr2:233932200-233934200 Genic enhancers Primary T cells from cord blood blood
37 chr2:233932200-233936000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr2:233932200-233937600 Weak transcription K562 blood
39 chr2:233932400-233933400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr2:233932400-233934000 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr2:233932400-233940200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:233932600-233932800 Enhancers Esophagus oesophagus
43 chr2:233932600-233933200 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr2:233932600-233934000 Enhancers Primary monocytes fromperipheralblood blood
45 chr2:233932600-233934000 Genic enhancers Primary hematopoietic stem cells short term culture blood
46 chr2:233932600-233935400 Enhancers Primary T helper cells fromperipheralblood blood
47 chr2:233932600-233937600 Weak transcription Stomach Mucosa stomach
48 chr2:233932600-233939600 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr2:233932600-233940400 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015