The 2.0 version of rSNPBase

Variant report

Variant rs6717732
Chromosome Location chr2:233935616-233935617
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:233929000-233936000 Genic enhancers Primary T cells fromperipheralblood blood
2 chr2:233929000-233939800 Weak transcription Left Ventricle heart
3 chr2:233929000-233940200 Weak transcription Gastric stomach
4 chr2:233929200-233940000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr2:233931000-233935800 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr2:233932000-233936200 Enhancers Primary neutrophils fromperipheralblood blood
7 chr2:233932200-233936000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr2:233932200-233937600 Weak transcription K562 blood
9 chr2:233932400-233940200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:233932600-233937600 Weak transcription Stomach Mucosa stomach
11 chr2:233932600-233939600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:233932600-233940400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr2:233932800-233936400 Weak transcription HepG2 liver
14 chr2:233933600-233939000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr2:233933800-233935800 Enhancers Primary T helper cells PMA-I stimulated --
16 chr2:233933800-233937600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr2:233933800-233938800 Weak transcription Placenta Placenta
18 chr2:233934000-233935800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr2:233934000-233936000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr2:233934000-233936600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr2:233934000-233936600 Weak transcription Duodenum Mucosa Duodenum
22 chr2:233934000-233937400 Weak transcription Fetal Thymus thymus
23 chr2:233934000-233937600 Weak transcription Colonic Mucosa Colon
24 chr2:233934000-233937600 Weak transcription Thymus Thymus
25 chr2:233934000-233937600 Weak transcription Spleen Spleen
26 chr2:233934000-233940200 Weak transcription Lung lung
27 chr2:233934200-233935800 Enhancers Primary B cells from peripheral blood blood
28 chr2:233934200-233939600 Genic enhancers Primary B cells from cord blood blood
29 chr2:233934800-233936000 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr2:233935200-233935800 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr2:233935200-233936000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr2:233935200-233937400 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr2:233935400-233936000 Genic enhancers Primary T helper cells fromperipheralblood blood
34 chr2:233935400-233936000 Enhancers Primary T regulatory cells fromperipheralblood blood
35 chr2:233935400-233936000 Enhancers Monocytes-CD14+_RO01746 blood
36 chr2:233935400-233937000 ZNF genes & repeats Dnd41 blood
37 chr2:233935400-233937400 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr2:233935600-233935800 Enhancers Primary hematopoietic stem cells blood
39 chr2:233935600-233936200 Genic enhancers Primary monocytes fromperipheralblood blood
40 chr2:233935600-233936200 Strong transcription Primary T cells from cord blood blood
41 chr2:233935600-233937000 ZNF genes & repeats GM12878-XiMat blood
42 chr2:233935600-233937200 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015