The 2.0 version of rSNPBase

Variant report

Variant rs55822628
Chromosome Location chr8:124480632-124480633
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:124430200-124484600 Weak transcription Psoas Muscle Psoas
2 chr8:124449600-124490800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr8:124451400-124489400 Weak transcription Spleen Spleen
4 chr8:124454000-124489400 Weak transcription Gastric stomach
5 chr8:124454600-124489000 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr8:124454600-124489200 Weak transcription Brain Hippocampus Middle brain
7 chr8:124461200-124490200 Weak transcription Brain Inferior Temporal Lobe brain
8 chr8:124461400-124482200 Weak transcription Brain Cingulate Gyrus brain
9 chr8:124461600-124486400 Weak transcription A549 lung
10 chr8:124464400-124483400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr8:124465600-124488800 Weak transcription Primary T cells from cord blood blood
12 chr8:124468800-124481000 Weak transcription NHEK skin
13 chr8:124469000-124488800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr8:124469200-124488000 Weak transcription Dnd41 blood
15 chr8:124473600-124481400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr8:124474200-124483600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr8:124474200-124489000 Weak transcription Primary hematopoietic stem cells blood
18 chr8:124475200-124489400 Weak transcription Fetal Intestine Small intestine
19 chr8:124475400-124481000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr8:124476800-124489200 Weak transcription H9 Cell Line embryonic stem cell
21 chr8:124477400-124481600 Enhancers HUVEC blood vessel
22 chr8:124478600-124489400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr8:124478600-124489400 Weak transcription Left Ventricle heart
24 chr8:124478800-124481000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr8:124478800-124484000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr8:124478800-124489600 Weak transcription Ovary ovary
27 chr8:124479000-124483400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr8:124479000-124483800 Weak transcription HSMMtube muscle
29 chr8:124479000-124498400 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr8:124479200-124489000 Weak transcription Fetal Lung lung
31 chr8:124479600-124481000 Weak transcription HMEC breast
32 chr8:124479600-124484000 Weak transcription NHDF-Ad bronchial
33 chr8:124479600-124484200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr8:124479600-124484400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr8:124479600-124484600 Weak transcription HSMM muscle
36 chr8:124479600-124484600 Weak transcription NHLF lung
37 chr8:124479600-124484800 Weak transcription Aorta Aorta
38 chr8:124479600-124485600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr8:124479600-124489200 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr8:124479600-124489400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr8:124479600-124499000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr8:124479800-124484000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr8:124479800-124484000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr8:124479800-124484400 Weak transcription NH-A brain
45 chr8:124479800-124484400 Weak transcription Osteobl bone
46 chr8:124480000-124484200 Weak transcription Muscle Satellite Cultured Cells --
47 chr8:124480000-124484200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr8:124480000-124488000 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr8:124480000-124489200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr8:124480400-124481400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015