Variant report

Variant rs55823315
Chromosome Location chr10:42852274-42852275
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:42842200-42857600 Weak transcription Aorta Aorta
2 chr10:42847000-42860600 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr10:42848000-42862600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr10:42848600-42852400 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr10:42848600-42852400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr10:42848600-42852400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr10:42848800-42862000 Weak transcription Stomach Smooth Muscle stomach
8 chr10:42850600-42862200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
9 chr10:42850600-42862200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr10:42850800-42859200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr10:42851200-42857600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr10:42851400-42854800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr10:42851600-42852600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr10:42851800-42854800 Weak transcription K562 blood
15 chr10:42852000-42852400 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr10:42852200-42852400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr10:42852200-42853200 ZNF genes & repeats Ovary ovary
18 chr10:42852200-42853400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
19 chr10:42852200-42862600 Weak transcription Brain Inferior Temporal Lobe brain

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