Variant report

Variant rs55826353
Chromosome Location chr6:73360743-73360744
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:73336200-73362800 Weak transcription Primary B cells from cord blood blood
2 chr6:73355200-73362200 Weak transcription Psoas Muscle Psoas
3 chr6:73357400-73361000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr6:73358400-73361000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr6:73358600-73360800 Enhancers Skeletal Muscle Female skeletal muscle
6 chr6:73358600-73360800 Enhancers HMEC breast
7 chr6:73358600-73362600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:73358800-73360800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr6:73358800-73360800 Enhancers Cortex derived primary cultured neurospheres brain
10 chr6:73358800-73362200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr6:73358800-73362600 Enhancers HSMM muscle
12 chr6:73358800-73362600 Enhancers HSMMtube muscle
13 chr6:73359000-73360800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr6:73359000-73362200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr6:73359600-73362000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:73359600-73362800 Enhancers HUES48 Cell Line embryonic stem cell
17 chr6:73359600-73373000 Weak transcription Primary hematopoietic stem cells blood
18 chr6:73359600-73398800 Weak transcription Primary B cells from peripheral blood blood
19 chr6:73359800-73360800 Enhancers Skeletal Muscle Male skeletal muscle
20 chr6:73359800-73386800 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr6:73360000-73360800 Enhancers iPS-20b Cell Line embryonic stem cell
22 chr6:73360000-73360800 Flanking Active TSS GM12878-XiMat blood
23 chr6:73360200-73360800 Flanking Active TSS Muscle Satellite Cultured Cells --
24 chr6:73360200-73360800 Flanking Active TSS NHEK skin
25 chr6:73360400-73360800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:73360400-73360800 Flanking Active TSS Aorta Aorta
27 chr6:73360400-73361000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:73360400-73362200 Enhancers NH-A brain
29 chr6:73360400-73372600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr6:73360600-73360800 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr6:73360600-73360800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:73360600-73361000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr6:73360600-73361000 Enhancers Brain Inferior Temporal Lobe brain
34 chr6:73360600-73361200 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr6:73360600-73361800 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr6:73360600-73362200 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr6:73360600-73362200 Weak transcription Fetal Heart heart
38 chr6:73360600-73362400 Enhancers Placenta Amnion Placenta Amnion
39 chr6:73360600-73362400 Enhancers Osteobl bone

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