Variant report

Variant	rs558736330
Chromosome Location	chr13:62652329-62652330
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761266	chr13:61928642-62690828	Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv948810	chr13:62003256-62968196	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv900252	chr13:62502166-62687843	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv900253	chr13:62515266-62660299	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv900254	chr13:62549703-62660299	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv900255	chr13:62549703-62680229	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv900256	chr13:62569634-62660299	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	nsv561872	chr13:62641458-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
9	esv1821989	chr13:62649010-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
10	esv1822563	chr13:62649010-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
11	esv1835325	chr13:62649010-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
12	esv1837584	chr13:62649010-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
13	esv1839175	chr13:62649010-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
14	esv1840195	chr13:62649010-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
15	esv1841571	chr13:62649010-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
16	nsv832630	chr13:62651865-62811428	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
17	esv1824850	chr13:62652084-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a
18	nsv561873	chr13:62652084-62657335	Active TSS	lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:62652000-62652400	Active TSS	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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