Variant report

Variant	rs55878601
Chromosome Location	chr8:67868433-67868434
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
TCF24	TF binding region
ENSG00000121022	Chromatin interaction
ENSG00000245910	Chromatin interaction
ENSG00000261787	Chromatin interaction
ENSG00000104218	Chromatin interaction

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11991444	0.87[AFR][1000 genomes]
rs11995838	0.87[AFR][1000 genomes]
rs35871529	0.83[AFR][1000 genomes]
rs59037712	0.87[AFR][1000 genomes]
rs61559694	0.87[AFR][1000 genomes]
rs6996635	0.95[AFR][1000 genomes]
rs7007783	0.95[AFR][1000 genomes]
rs73691152	1.00[AFR][1000 genomes]
rs73691160	0.87[AFR][1000 genomes]
rs73691181	0.87[AFR][1000 genomes]
rs73691184	0.87[AFR][1000 genomes]
rs73693130	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3433426	chr8:67859447-67876356	Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67867200-67868600	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr8:67867200-67869000	Enhancers	Fetal Heart	heart
3	chr8:67868200-67868600	Enhancers	Psoas Muscle	Psoas

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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