Variant report

Variant	rs55895203
Chromosome Location	chr4:144062873-144062874
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs55747899	0.86[AFR][1000 genomes]
rs55915992	0.97[AFR][1000 genomes]
rs57368559	0.81[AFR][1000 genomes]
rs57440597	0.89[AFR][1000 genomes]
rs58063714	0.92[AFR][1000 genomes]
rs59442113	0.89[AFR][1000 genomes]
rs60222887	1.00[AFR][1000 genomes]
rs61242181	0.86[AFR][1000 genomes]
rs6825768	0.82[AFR][1000 genomes]
rs73850675	1.00[AFR][1000 genomes]
rs73850676	0.92[AFR][1000 genomes]
rs73850677	0.90[AFR][1000 genomes]
rs73850678	0.90[AFR][1000 genomes]
rs73850679	0.92[AFR][1000 genomes]
rs73850680	0.97[AFR][1000 genomes]
rs73850681	0.92[AFR][1000 genomes]
rs73850682	0.92[AFR][1000 genomes]
rs7667499	0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034895	chr4:143945139-144079655	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:144062000-144068200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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