Variant report

Variant	rs57440597
Chromosome Location	chr4:144087663-144087664
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:144084170..144087802-chr4:144103961..144107142,4	K562	blood:
2	chr4:144086302..144088230-chr4:144104395..144107142,2	K562	blood:

Variant related genes	Relation type
ENSG00000250326	Chromatin interaction
ENSG00000170185	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs55722985	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55725000	1.00[AMR][1000 genomes]
rs55747899	1.00[AMR][1000 genomes]
rs55760681	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55895203	0.89[AFR][1000 genomes]
rs55915992	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56226922	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58063714	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58798255	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59311168	1.00[AMR][1000 genomes]
rs59434608	1.00[AMR][1000 genomes]
rs59442113	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60222887	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60607336	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61165291	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61242181	1.00[AMR][1000 genomes]
rs61286725	1.00[AMR][1000 genomes]
rs6825768	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6855499	1.00[AMR][1000 genomes]
rs73850675	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850676	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850677	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850678	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850679	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850680	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850681	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850682	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850684	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850685	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850686	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850687	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850688	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850691	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850693	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73850694	1.00[AMR][1000 genomes]
rs7667499	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:144078400-144097600	Weak transcription	Brain Hippocampus Middle	brain
2	chr4:144081400-144088000	Weak transcription	Primary T cells from cord blood	blood
3	chr4:144087400-144088400	Active TSS	K562	blood
4	chr4:144087600-144088400	Active TSS	HepG2	liver

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