Variant report

Variant	rs55906147
Chromosome Location	chr5:57765555-57765556
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11948619	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11950875	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs154489	0.89[ASN][1000 genomes]
rs154676	0.89[ASN][1000 genomes]
rs154677	0.89[ASN][1000 genomes]
rs2591860	0.89[ASN][1000 genomes]
rs32617	0.91[ASN][1000 genomes]
rs4700287	0.96[ASN][1000 genomes]
rs4700290	0.96[ASN][1000 genomes]
rs62366398	0.96[ASN][1000 genomes]
rs695921	0.89[ASN][1000 genomes]
rs7723549	0.97[ASN][1000 genomes]
rs861293	0.88[ASN][1000 genomes]
rs863846	0.89[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57757000-57765600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr5:57763000-57771000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr5:57763200-57765600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr5:57763400-57765600	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr5:57765400-57765600	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr5:57765400-57766600	Enhancers	Primary B cells from cord blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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