Variant report

Variant	rs55923988
Chromosome Location	chr6:11594972-11594973
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10947356	0.85[EUR][1000 genomes]
rs10947357	0.85[EUR][1000 genomes]
rs10947400	0.85[EUR][1000 genomes]
rs10947402	0.85[EUR][1000 genomes]
rs10947403	0.85[EUR][1000 genomes]
rs10947419	0.85[EUR][1000 genomes]
rs12189605	0.85[EUR][1000 genomes]
rs12189829	0.85[EUR][1000 genomes]
rs12190208	0.85[EUR][1000 genomes]
rs12191269	0.85[EUR][1000 genomes]
rs12191798	0.85[EUR][1000 genomes]
rs12193222	0.85[EUR][1000 genomes]
rs12193579	0.85[EUR][1000 genomes]
rs12194303	0.85[EUR][1000 genomes]
rs12194423	0.85[EUR][1000 genomes]
rs12194522	0.85[EUR][1000 genomes]
rs12194708	0.85[EUR][1000 genomes]
rs12195075	0.85[EUR][1000 genomes]
rs12195374	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12196157	0.85[EUR][1000 genomes]
rs12197783	0.85[EUR][1000 genomes]
rs12199737	0.85[EUR][1000 genomes]
rs12201467	0.85[EUR][1000 genomes]
rs12202370	0.85[EUR][1000 genomes]
rs12203104	0.85[EUR][1000 genomes]
rs12203396	0.85[EUR][1000 genomes]
rs12203843	0.83[EUR][1000 genomes]
rs12207574	0.85[EUR][1000 genomes]
rs12208514	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12209963	0.85[EUR][1000 genomes]
rs12210023	0.85[EUR][1000 genomes]
rs12211376	0.85[EUR][1000 genomes]
rs12212790	0.85[EUR][1000 genomes]
rs12214484	0.83[EUR][1000 genomes]
rs12525082	0.85[EUR][1000 genomes]
rs16868542	0.85[EUR][1000 genomes]
rs16868544	0.85[EUR][1000 genomes]
rs16871460	0.85[EUR][1000 genomes]
rs16871461	0.85[EUR][1000 genomes]
rs16871481	0.85[EUR][1000 genomes]
rs16871484	0.85[EUR][1000 genomes]
rs2275398	0.92[EUR][1000 genomes]
rs489364	0.85[EUR][1000 genomes]
rs9461842	0.85[EUR][1000 genomes]
rs9461895	0.92[EUR][1000 genomes]
rs9469363	0.85[EUR][1000 genomes]
rs9469368	0.85[EUR][1000 genomes]
rs9469544	0.92[EUR][1000 genomes]
rs9469545	0.92[EUR][1000 genomes]
rs9469546	0.92[EUR][1000 genomes]
rs9469548	0.92[EUR][1000 genomes]
rs9469550	0.92[EUR][1000 genomes]
rs9469561	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9469563	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9791196	0.85[EUR][1000 genomes]

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11591400-11596600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:11592800-11595200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr6:11593000-11598600	Weak transcription	A549	lung
4	chr6:11593200-11596000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr6:11593200-11597000	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr6:11593200-11600800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr6:11593200-11605400	Weak transcription	Right Atrium	heart
8	chr6:11593600-11595200	Strong transcription	HSMM	muscle
9	chr6:11593600-11604600	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr6:11593800-11597600	Weak transcription	Ovary	ovary
11	chr6:11593800-11609800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr6:11594200-11595200	Strong transcription	HSMMtube	muscle
13	chr6:11594800-11598000	Weak transcription	Placenta	Placenta

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