Variant report

rSNPs within LD-proxies of this variant (count:7)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1004821	chr4:16055996-16830629	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv537046	chr4:16055996-16830629	Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv593780	chr4:16519719-16557143	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv1005782	chr4:16521109-16554088	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv537049	chr4:16521109-16554088	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:16534200-16546600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr4:16534600-16546000	Weak transcription	Adipose Nuclei	Adipose
3	chr4:16535400-16550200	Weak transcription	Fetal Brain Female	brain
4	chr4:16535800-16548800	Weak transcription	Left Ventricle	heart
5	chr4:16539400-16557000	Weak transcription	Osteobl	bone
6	chr4:16539600-16547400	Weak transcription	Pancreas	Pancrea
7	chr4:16540000-16546200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr4:16541000-16558000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr4:16545600-16546200	Enhancers	Fetal Kidney	kidney
10	chr4:16545600-16547000	Enhancers	Fetal Stomach	stomach
11	chr4:16545600-16547200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr4:16545600-16547600	Enhancers	Fetal Lung	lung
13	chr4:16545800-16546000	Enhancers	Fetal Muscle Trunk	muscle
14	chr4:16545800-16546000	Enhancers	Fetal Muscle Leg	muscle
15	chr4:16545800-16546200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr4:16545800-16546400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr4:16545800-16546400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr4:16545800-16546400	Enhancers	NHLF	lung
19	chr4:16545800-16547000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr4:16545800-16547200	Enhancers	Placenta	Placenta

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