Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10080021	0.87[ASN][1000 genomes]
rs10463689	0.81[ASN][1000 genomes]
rs10519497	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11739552	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11741620	0.81[ASN][1000 genomes]
rs11746186	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11957082	0.87[ASN][1000 genomes]
rs1603123	0.81[ASN][1000 genomes]
rs17141330	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17141334	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17141342	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34215476	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4264976	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4286715	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs55813945	0.87[ASN][1000 genomes]
rs58093687	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60269947	0.87[ASN][1000 genomes]
rs60756555	0.96[ASN][1000 genomes]
rs6595020	0.87[ASN][1000 genomes]
rs6862441	0.87[ASN][1000 genomes]
rs6870246	0.84[ASN][1000 genomes]
rs6891356	0.81[ASN][1000 genomes]
rs73783725	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73783730	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015741	chr5:116525936-116665270	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:116543000-116559000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr5:116557400-116558400	Weak transcription	Stomach Mucosa	stomach

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